Serratia liquefaciens: M495_19200
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Entry
M495_19200 CDS
T02740
Name
(GenBank) RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
slq
Serratia liquefaciens
Brite
KEGG Orthology (KO) [BR:
slq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slq03009
]
M495_19200
Enzymes [BR:
slq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M495_19200
Ribosome biogenesis [BR:
slq03009
]
Prokaryotic type
rRNA helicases
M495_19200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_11
Cas3-like_C_2
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
AGQ32488
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All DBs
Position
4015365..4016690
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AA seq
441 aa
AA seq
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MTVTNFSELELDERLINALRDKGYERPTAIQAEAIPPAMDGRDVLGSAPTGTGKTAAFLL
PVLQHLLDFPRKKSGPPRVLILTPTRELAMQVADQARELAAHTSLDIATITGGVAYMNHA
EVFSENQDVVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETISAETRW
RNQTLLFSATLEGDAIREFAERILKEPVEVEADPSRRERKKILQWYYRADDVQHKTALLV
HLLQQPDVQKSVIFVRKRERVHELAGWLREAGINTCYLEGEMVQAKRNEAVKRMMDGRVN
VLVATDVAARGLDILDITHVFNFDMPRTADTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
GKVGRYLNEPLKARVIDELRPSTKVPSEKSNGKPSKKVLAKRASDKEKNKEKAKVKVRHR
DAKNVGKRRQPKAKPEGSGAK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaaccaatttttccgaactcgaactcgatgaacgcctgataaacgccctgcgc
gataaaggctacgaacgcccaaccgccattcaagccgaggcgatcccgcctgcgatggat
gggcgcgacgtattgggttcggcgccaaccggcaccggcaagaccgcggcatttttgctg
ccggtattgcaacatctgctcgacttcccacgtaagaagtccggcccaccgcgcgtactg
atcctgactccgacgcgcgagctggcgatgcaggtagccgatcaggctcgtgaactggct
gctcatacttcgctggatatcgccaccatcaccggcggcgtagcctatatgaaccacgcg
gaagtcttcagtgaaaaccaggacgtggtggtcgcgaccaccggccgcctgctgcagtat
attaaagaagaaaacttcgactgccgcgcagtagagacgctgatcctcgatgaagccgac
cgcatgctcgacatgggcttcgcgcaggacatcgaaaccatttccgccgagacccgctgg
cgtaaccagaccctgctgttctccgcgacgctggaaggcgatgccatccgcgaattcgcc
gaacgcattctgaaagaaccggtagaggtcgaagccgatccgtcacgccgcgaacgtaaa
aagatcctgcaatggtactatcgcgccgacgacgtacagcataaaaccgccctgttggtg
cacttgctgcagcaaccggacgtgcagaaatccgttatcttcgtgcgcaaacgtgagcgt
gtgcatgagctggccggctggctgcgcgaggcaggcatcaacacctgttacctcgaaggc
gaaatggtgcaggccaagcgcaacgaagcggtaaaacgtatgatggacggccgtgtgaac
gtgctggtcgcaaccgacgttgccgcccgtggtctggatatcctggatatcacccacgtg
ttcaacttcgacatgccgcgcaccgcagatacctatctgcaccgtatcggccgtaccggt
cgtgccgggcgtaagggcaccgcaatttcgttggttgaagcacacgaccacctgctgctg
ggcaaagtgggccgttatctgaacgagccgctgaaagcacgcgtgatcgatgagctgcgt
ccatcaaccaaagtgccaagcgaaaagagcaacggcaagccttcgaagaaggtactggcc
aaacgcgcgtcagacaaagaaaagaacaaagaaaaagccaaggtgaaagtacgtcatcgc
gatgcgaaaaacgtaggcaaacgccgccagccaaaggccaagcctgagggcagcggcgcg
aagtaa
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