Serratia liquefaciens: M495_23760
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Entry
M495_23760 CDS
T02740
Name
(GenBank) RNase II stability modulator
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
slq
Serratia liquefaciens
Pathway
slq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
slq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
M495_23760
Enzymes [BR:
slq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
M495_23760
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GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_10
RIP
GGDEF_2
PAS_3
Motif
Other DBs
NCBI-ProteinID:
AGQ33346
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All DBs
Position
5007284..5009278
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AA seq
664 aa
AA seq
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MFADQGPMLLNAHFGTNSPYWRLAFDSNALALSAVKGKTHMAVALSAMQAAKIRRLTGIT
ASLDITITLGGEPIHLHLVGRRINNQEWAGTASAFSDTQSVARDLVHGLSFAEQVVSEAN
SVIVIVDQHGRIQRFNRLSEEYTGLHEHDVIGKNVFQLFMSPEEAAASRRNIAGFFRNGS
SYEVERWIKTVKGERLFLFRNKFVHSGSGKNEVFLICSGTDITEERRAQERLRVLANTDI
ITGLPNRNAIQDKITQAITARDGNHVGLVYLDLDNFKKVNDAYGHMFGDRLLVEVSLAVL
GCLAPDQTLARLGGDEFLVLAQQADREMLQRLAQRIIDRLKTPFRIGLIEVYTGCSIGIA
LCPEHGNDLDSLIRSADTAMYVAKEHGKRTYTVFSPEMNKRVAEYMWLDTNLRKGLEQDQ
LVVYYQPKIEALSGKVCSVEALVRWDSPERGLIPPLQFISYAEESGLIGPLGRWVLQTAA
RQAAQWQRQGLNLRVAVNLSARQLVDDSIVEDLAQVLQCNHLAPCLLDFELTESSLIEDE
KRAREVITRLRDLGAQVHLDDFGTGYSSLAQLARIPLDAIKLDKSFVRGVNCNPVSQSLV
RAIVAAAEALRFRVIAEGVETESENQFLDEVGVDEKQGFLFARPMLPDQLEHWLQSYCPH
PSSA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcagaccaaggccctatgcttcttaatgcccacttcggcaccaacagcccatat
tggcggttggcgtttgacagcaatgccctggcgctgtcggcagtgaaaggaaaaacccat
atggccgtggcgctcagcgccatgcaggcagccaaaatccgccgtctgaccggcattacc
gccagccttgatatcaccatcacgctggggggtgagccgatacatctgcatctggtcggg
cgcaggatcaataatcaggaatgggcgggtaccgcctcggccttcagcgacacccaatcg
gtcgcccgcgatctggtacacggcctgtcttttgccgaacaggtggtgtcagaagccaat
tcggtgattgtgattgttgaccagcacggtcgtattcagcgctttaaccgactgagcgaa
gagtacaccggcctgcacgaacatgatgttattggtaaaaacgtctttcagctgtttatg
agcccggaagaagcggcggcatcgcggcgaaacatcgccggtttttttcgcaacggatca
tcctatgaggtggaacgttggatcaaaacggtgaagggggaacggctgttcttgtttcgc
aacaagttcgtccacagcggcagcggtaaaaatgaggtgttcctgatttgctccggcacc
gacatcaccgaagagcgtcgcgctcaggaacgactgcgggtattggccaataccgacatt
attaccggcctgcccaatcgcaatgccattcaggacaaaatcacccaggcaatcaccgca
cgcgacggcaatcatgtcggtctggtgtatctcgatctcgacaactttaagaaagttaat
gacgcttacggccatatgttcggcgaccgtttattggtggaggtgtcgttggcggtgctt
ggctgtctcgcaccagaccaaaccctggctcgcctggggggcgatgagtttctggtgctt
gcccagcaggccgatcgcgagatgctgcaacggctggcacagcgcattatcgaccgcttg
aagaccccctttcgtatcggccttatcgaggtctataccggctgttcgattggcattgcg
ctatgccccgaacatggtaacgatctcgacagcctgatccgcagtgctgataccgccatg
tacgtcgccaaagagcacggcaaacgcacctataccgtgttctcgccggaaatgaacaaa
cgcgtcgcggaatacatgtggctggataccaacctgcgaaaagggctggaacaagatcaa
ctggtggtgtactaccagcccaaaatcgaggcgctcagcggcaaggtgtgcagcgtagaa
gctttggtgcgttgggattcacccgagcgcggcctgatcccaccgttgcagtttatttct
tatgccgaagaatccggtctgataggcccactcgggcgctgggtgctgcaaaccgccgcc
agacaggccgcacagtggcaacgacagggcttgaatctgcgggtggcagtgaatctttcc
gcacggcagttggttgatgattccatcgttgaagatctcgctcaggtattgcagtgcaat
cacctggccccctgcctgctcgacttcgaactcacggaaagcagcctgattgaggatgaa
aaacgtgcccgcgaagtgatcacgcggttacgcgatctgggggcgcaggtgcatctcgat
gattttggcaccggttactcttctttggcccagttggcccgcattccgctggatgccatc
aagctggataaaagcttcgtgcgcggggtgaattgcaatccggtttcgcagtcgctggtg
cgcgccatcgtcgcggcggccgaagcgctcaggttccgggtgattgccgaaggtgtagag
accgaaagcgaaaatcagtttctggatgaagtcggtgtggatgagaaacaaggatttctg
tttgcgcggccaatgctcccggaccagttggaacattggctgcaatcttattgcccgcat
ccctcctcagcctga
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