Salinispira pacifica: L21SP2_0165
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Entry
L21SP2_0165 CDS
T03013
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
slr
Salinispira pacifica
Pathway
slr03420
Nucleotide excision repair
slr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L21SP2_0165
03430 Mismatch repair
L21SP2_0165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slr03400
]
L21SP2_0165
Enzymes [BR:
slr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L21SP2_0165
DNA repair and recombination proteins [BR:
slr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L21SP2_0165
MMR (mismatch excision repair)
Other MMR factors
L21SP2_0165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
DUF6381
Motif
Other DBs
NCBI-ProteinID:
AHC13609
UniProt:
V5WDH9
LinkDB
All DBs
Position
complement(186086..188278)
Genome browser
AA seq
730 aa
AA seq
DB search
MKPIHESLELLNEQQRNAVLHKGSALLILAGAGSGKTRVITVKIAYLIEELGVDPRSILA
VTFTNKAAGEMRERARDLSEAAEGVVIRTFHSFGAWLMRRNAAALNLSSNFTIYDDDDSL
SLLATLYPEKSRQQLKQYNTLISRAKDSCLGPDDSLEDISGDPELQTVYAAYERRLREIG
NSDFGDLILRPIELLQSDPAIAERIRNRFSVILVDEYQDSNHAQYRLLSELYRPGSYICV
VGDDDQSIYRFRGAEVKNILNFPELFDNTDIIKLEQNYRSTNPILELAGSVVANNQGRLG
KQLWTSREDGALPVIARLSDSDAEVDYVLRLIRDDFEGETAILYRTNAQSRLFETRFLQE
GIPYRIVGTLRFYEREEIKDAVALLKLIANPKDEVSFNRIINKPSRGIGKSALADIKTHL
HPARGNLVLAAEYAMASARKRTSTGIAAFLDVIRGMETQLKESGGGHLGELINSGLERSG
LAQYYINQDEIAGSTKIQNLEELVNAASLYSPDYEGLVEFLEAIELDSSREQSDEDAMVT
LITMHNTKGLEFDRVVITGLEDDLFPRADNGDPDALEEERRLFYVAITRARHELHITSCA
SRRIHGRIQRLNPSRFLGEIPGELVEFSGRSAPDTPGDPSSIFSDEDPWAAWSRAGQGEP
GFSRHSGGKEEDVQGDYPRGQAVYHDDYGPGEVIKSMFNGSEEVIIVRFQSGQTAQFIPR
FSGIEKISSF
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcccattcatgaaagccttgaattactgaacgagcagcagcggaatgcggtgctg
cacaagggaagtgccctgctgattcttgcaggggcgggttccgggaagacaagggttatt
accgtaaagattgcctatctcatcgaggaactgggtgtggatcccagatcaattcttgcg
gttacgttcacaaacaaggcggcgggtgaaatgcgggaacgcgcccgggatctgagtgaa
gccgcagagggtgtggtgatccgcacctttcacagcttcggagcctggctcatgcgcagg
aatgctgccgcactgaatttatcatcaaactttaccatttacgacgacgatgacagcctg
agccttcttgcaaccctgtatccggaaaaatcacgacagcagctgaaacagtataatacc
ctgatcagtcgggcaaaagacagctgtctcggcccggatgattccctggaagatatcagc
ggggatccggaactgcagacagtatatgcagcctacgaacggcggctgagggaaatcggg
aacagcgatttcggagatctgattctccgccccatcgaattgcttcaatccgaccccgcc
atagcggaacgcatccggaaccgcttttccgtaatcctggtggatgaatatcaggactcc
aaccacgctcagtaccggctgctcagtgaactgtaccgcccgggaagctatatttgtgta
gtgggagacgacgaccagtccatttaccggttcaggggagctgaagtgaaaaacatcctg
aacttcccggagctgttcgataacacggatatcatcaaacttgaacagaattaccgcagc
accaatcccattctcgaactggccggctctgtggtggccaataaccagggacggctggga
aaacagctctggacaagccgtgaagacggagcccttccggtaatcgccagactcagcgac
agtgatgcagaagttgactatgtactccggctgatacgggatgattttgagggtgaaact
gccatcctgtaccgcaccaatgcacagagccgtctctttgagacccggttccttcaggaa
ggcataccttaccgaatcgtcgggaccctgcggttttatgaacgggaagagatcaaggat
gccgttgcccttctgaaactcatcgccaacccgaaggatgaagtatccttcaacagaatt
atcaacaaaccatccagaggcatcggaaagtctgcgctggcggatataaaaactcacctt
caccccgcccggggcaacctggttcttgcggcggaatacgcaatggcatcagccagaaaa
cgcacatcaaccggaatcgcagcctttctggatgtgatcaggggaatggaaacgcaactc
aaggagagcggcggcgggcatcttggggagctgatcaattccggcctggagcgcagcggt
ctcgcccaatactatatcaatcaggacgaaattgccgggagcactaaaattcaaaacctg
gaagaacttgtgaatgcagccagcctctattcaccggattacgaaggtctggtggaattc
cttgaagccatagaactggacagctcccgggagcaaagtgatgaagatgccatggtgact
ctcatcaccatgcataataccaaagggctggagttcgacagagttgtgattaccggtctg
gaagatgatctgttcccccgggcggataacggagacccggacgcccttgaagaggagcgc
cggcttttttatgtggccataacccgtgcccggcatgagcttcatattaccagctgcgct
tcccgccgcatccacggaagaattcagcggctgaacccctcccgttttctgggggaaatc
cccggcgaactggttgaattttccggacgcagtgcaccggacacccccggggatccctct
tcaatattctcagacgaagacccctgggccgcatggtcccgggcaggacagggcgaaccc
ggattttcccgtcactccggcggcaaagaggaagacgtccagggtgactatccccgtggg
caggcggtgtaccatgacgattatggtcccggagaggtgatcaaaagcatgttcaacggc
agcgaggaagtgatcatcgtcaggtttcagtcgggacaaaccgcccagttcatcccccgc
ttcagcggtatagaaaaaatcagcagcttctaa
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