Salinispira pacifica: L21SP2_0784
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Entry
L21SP2_0784 CDS
T03013
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
slr
Salinispira pacifica
Pathway
slr00260
Glycine, serine and threonine metabolism
slr00460
Cyanoamino acid metabolism
slr00630
Glyoxylate and dicarboxylate metabolism
slr00670
One carbon pool by folate
slr00680
Methane metabolism
slr01100
Metabolic pathways
slr01110
Biosynthesis of secondary metabolites
slr01120
Microbial metabolism in diverse environments
slr01200
Carbon metabolism
slr01230
Biosynthesis of amino acids
slr01240
Biosynthesis of cofactors
slr04981
Folate transport and metabolism
Module
slr_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
slr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
L21SP2_0784
09102 Energy metabolism
00680 Methane metabolism
L21SP2_0784
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
L21SP2_0784
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
L21SP2_0784
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
L21SP2_0784
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
L21SP2_0784
Enzymes [BR:
slr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
L21SP2_0784
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Cys_Met_Meta_PP
Beta_elim_lyase
OKR_DC_1
GCS2
Motif
Other DBs
NCBI-ProteinID:
AHC14206
UniProt:
V5WGB5
LinkDB
All DBs
Position
833935..835221
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AA seq
428 aa
AA seq
DB search
MSRIEAFDPELYEVIQKETRRQLEKIELIASENFTSQAVLEAAGSVLTDKYAEGYPGKRY
YGGCEYVDMAEDLARDRVKKLYNADHANVQPHSGSSANMAVYMTLLKPGDTILGMDLAHG
GHLTHGASVNFSGQLYNIISYGVSKESEQLDYDEIRKLAETHKPKLIIAGASAYPRIIDF
KRFREIADSVGAFFVTDMAHIAGLVAAGLHPTPLPHAHFTTTTTHKTLRGPRGGLILIGK
DGENSLGVVAPKSGRTKNWSELVDSAVMPGIQGGPLMHVIAAKAVAFKEALEPEFKTYQQ
QILDNAKALASHFAENGIRVVSGGTENHLMLLDLTDLGISGKEGEKMLDAANITVNKNGI
PFDTRSPLVTSGIRVGTPAVTSRGMKEDDVRQVGDFIMEVLKSKGDEKVISKVAGEVKTF
TSKFPRRS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
ttgtcccgaattgaagcttttgatcccgaattatacgaagttattcagaaagaaacccgg
cgtcagcttgaaaaaatcgaactgatagccagtgagaatttcacttcccaggccgtactg
gaagccgcaggcagcgtattaaccgataaatatgccgaaggatatccggggaaacgctat
tacggcgggtgtgaatatgttgatatggcggaggaccttgcccgggaccgggtgaaaaaa
ctctacaatgccgatcacgcaaacgtgcagccccattcgggaagcagcgcaaacatggcc
gtgtacatgaccctcctgaagcccggagacaccattctggggatggatctggcccacggc
gggcaccttacccacggtgccagcgtgaacttctccggtcagctctataatatcatcagt
tacggcgtatccaaagaaagcgaacagctggattacgacgagatccggaaacttgccgaa
acccataaaccgaaactgatcatcgccggggcatccgcatatccccggataatcgatttc
aagcgcttccgggaaattgccgattcagtcggtgcattctttgtaacagatatggctcat
atagcgggactggtcgctgcagggctgcatcccacacctctgccccatgcccacttcacc
acaaccaccacccacaaaaccctccggggaccccgtggcggactgatcctcatcggaaag
gacggggaaaacagcctgggagttgttgcgcccaagagcggcagaaccaaaaactggagc
gaactggtggactcggcggtaatgccgggaattcagggcgggccgcttatgcacgtcatt
gcagccaaggccgtggcattcaaggaagccctggaaccggaattcaaaacctatcagcag
cagatactggacaatgccaaggcactggcatcccacttcgccgagaacggtatccgggtg
gtatccggaggcacggaaaatcatctcatgcttttggatctcaccgacctgggaatcagc
ggtaaagagggagagaaaatgctggatgcggcaaatatcaccgtgaataaaaatgggatc
ccctttgatacccgaagtcccctggtaaccagcggtatccgggtgggtactcctgcggta
accagccggggcatgaaggaagatgatgtacggcaggtgggagacttcatcatggaagtg
ctcaagagcaagggcgatgagaaggtgatttccaaagttgccggggaagtgaaaacgttc
acctccaaatttcccagaagaagctga
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