Salinispira pacifica: L21SP2_1204
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Entry
L21SP2_1204 CDS
T03013
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
slr
Salinispira pacifica
Pathway
slr02020
Two-component system
slr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
slr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L21SP2_1204
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L21SP2_1204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slr03021
]
L21SP2_1204
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
slr02035
]
L21SP2_1204
Transcription machinery [BR:
slr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L21SP2_1204
Bacterial motility proteins [BR:
slr02035
]
Flagellar system
Flagellar assembly proteins
Stator
L21SP2_1204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
DUF1612
Motif
Other DBs
NCBI-ProteinID:
AHC14605
UniProt:
V5WG63
LinkDB
All DBs
Position
1275355..1276143
Genome browser
AA seq
262 aa
AA seq
DB search
MAEKTYTEQDELRLWKEYKETGNPDIRDRMVKQYAPLVKYVAGKVAVGMPQNVEFDDLVG
YGVFGLFDAIEKFDPDKHVKFKTYAVTRIRGAIFDELRAIDWVPRSVRQKSREIEDTIRR
LEASLGRSASDAEIAKEMGMSDKEYEKTMLRVSGTSILSLNDVWYTGEDNDKVSIADSIE
SPDNFNPDNIVEKEEVKRVIIQSIQELPEKEKTVLVLYYYEDLTLKEIGKVLEVTESRIS
QLHTKAIMRLRAKLTNIKKGIF
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaaaacctatacggaacaggatgagttgcgcctctggaaagagtataaggaa
accggaaaccccgatattcgggacagaatggtgaagcaatatgcgccccttgtaaaatat
gttgccggcaaggttgccgtgggaatgccccagaatgtggagttcgacgatctggtggga
tacggcgtgttcggactctttgacgccattgaaaaattcgatccggacaagcacgtaaaa
ttcaaaacatatgcggttacccgtatccggggtgcaatattcgatgaacttcgggcgata
gactgggtaccccgctcggtacgccagaaatcccgggaaatagaggataccatccgccga
ctggaagccagtctcggcaggtcagccagtgatgcggaaattgccaaggaaatgggcatg
agcgacaaggagtatgagaaaaccatgctccgggtcagcggaaccagcattttgagcctc
aacgacgtgtggtataccggcgaagataacgacaaagtatcaatcgctgacagtatcgaa
agccccgataacttcaaccccgataatatcgtggaaaaggaagaagtgaagcgggttatc
atccaatccatacaggaacttcctgaaaaggaaaaaaccgtgctggttctctactactat
gaagatcttacgttgaaagaaatcgggaaggtgcttgaagtcaccgaatcaagaatcagt
cagctccataccaaagcgattatgcggctgagagccaaactcacaaatattaagaaaggg
atattctaa
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