Salinispira pacifica: L21SP2_1222
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Entry
L21SP2_1222 CDS
T03013
Name
(GenBank) ATP-dependent RNA helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
slr
Salinispira pacifica
Brite
KEGG Orthology (KO) [BR:
slr00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
L21SP2_1222
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
WHD_HRQ1
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AHC14623
UniProt:
V5WFR4
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Position
1296994..1299324
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AA seq
776 aa
AA seq
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MPENGKTMNAQDEDIIQQLRNDPDFMKHVTHWEVIPPREGVYSEFPPELNPKIADGLRNR
GIDRLYSHQAEAFTSSHAGKHMVIVTPTASGKTLSYNLPVLQTILNEPDSRALYLFPTKA
LSQDQQSALNELTLNSELGVNIATYDGDTPASLRSSAREKGQIIISNPDMMHAGILPNHP
KWIKFLKNLRYIVIDELHAYRGIHGSHLANLIRRIQRICRFYGSSPRFICCSATIGNPAE
LAARVINSDVELIDTNGAPSGEKHLVLYNPPLVDRVQGIRRGTVKESQRIALRLLRGGVK
TIVFARSRVRVELIAGYIRKSLENLYSDNERIRVEAYRGGYLPNERREIEKGLREGLIQG
VVSTNALELGIDIGGLDAAVMAGFPGSIASVWQQAGRAGRSASRSIAILVASASPLDQYM
VKNNGYFLGSSPEAGFINPENFYVRMDHIKCAAFELPFPENGDREFPDAPMFLRILEEDG
TVRLSRGRYYWSDRGYPAEGISLRSATTDNVVIIDTTAGKNTVIGEMDRPSAKELIYPKA
VYIHRGEQYVVHQLDLEERRCYVEQKELNYYTDAVVKRDIKVLEEDEQHRVLGATVVFGD
ILVRTQVAKFKKLRFNSHENIGFGEIHLPEEEMHTNSAVILLEKDSPPGKIFLSREPGEQ
TAVISRLGNLIQATAPAFLLCDPRDLGIAERIRDPHFASPALYVYDKYPGGSGLSATLVG
KLPEILRASLELVENCPCEEGCPSCIGPRLKDEEIGENPKPMVIQFISRWMEATGS
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaaacggaaaaacgatgaacgcccaggatgaggatattatccagcagctccgg
aatgatccggattttatgaaacacgtcacccactgggaggtgatcccccccagggaaggt
gtgtattcggaatttcccccggagcttaatcccaaaatagctgacggcctcaggaacaga
gggatagaccggctctacagccatcaggctgaagcattcaccagctcacatgcgggaaag
cacatggtaatcgtcacccccacggcttccggaaaaaccttgagctacaatctgcccgta
ctccagaccattctcaacgagccggacagcagagcgctgtatctttttcccaccaaggct
ctgtctcaggatcagcagtcagcgctgaatgaactcaccctgaactccgaactgggggtg
aatatcgccacctatgacggcgacactcctgcaagtctcagaagcagcgcccgggagaaa
ggacagattatcatcagcaatccggatatgatgcacgcgggaattcttcccaaccatccc
aagtggatcaagtttctgaagaacctccgctacatcgtgatcgatgagcttcatgcctac
agggggattcacggcagtcatctggccaacctgatccggagaattcagagaatatgccgg
ttttacggcagcagtccccggttcatctgctgctccgccaccatcggaaaccctgcagaa
ctggcagccagagtgattaattctgatgtggaactcatagataccaacggagccccttcc
ggggagaagcatctggtgctttacaatcctccgctggttgaccgggtacagggcatccgc
cggggaacggtaaaagagagccagaggatcgccctgagactgctcaggggcggggtgaag
accatcgtctttgcccggagcagagtccgggttgagcttattgccggctacatcagaaaa
agccttgaaaatctctacagcgacaatgaacggatccgggtggaagcctaccggggcgga
tatcttccgaatgagcgacgggaaattgagaagggtctgcgtgaaggtctcatacagggg
gtggtttctaccaatgcactggaattgggtattgatatcggtgggcttgatgcggcggta
atggcagggttccctggttccatcgcatcggtatggcagcaggcaggaagggcagggcga
agcgccagccggagcattgcaatcctcgtggcctccgcttctcctttggatcagtacatg
gtcaaaaacaacggatactttctgggctccagtcccgaggcggggtttattaatccggaa
aacttttatgtccgaatggatcatattaaatgcgcagccttcgagcttccctttcccgaa
aacggggaccgggagtttcccgacgcccccatgtttctccggattctggaggaggatggc
acggtacgattgagccggggaagatactactggtccgaccggggctatcccgccgaggga
atcagcctgcgctcggcaaccaccgacaatgtggtgattatcgatacaaccgccggaaaa
aataccgtcatcggggaaatggaccgacccagcgccaaggagctgatttatcccaaagcc
gtgtacattcatcggggggagcagtatgtggtacatcagctcgatcttgaagagcgccgc
tgctatgtggagcagaaagagctgaactactacactgatgcagtggtgaaacgggacatc
aaggtgcttgaagaagatgagcagcatcgagttctgggggcaactgtggtgttcggggat
attctggtgcgtacccaggtcgccaaattcaagaagcttcgattcaacagtcatgaaaat
atcggtttcggcgaaattcaccttcccgaagaggaaatgcacaccaattcggcggtaatc
ctcctggagaaggattctcctcccggaaaaatatttctctccagggaacccggtgaacag
acagcagtgatcagccggctgggtaacctcatccaggccaccgcacccgccttcctgctc
tgtgatcccagggatctgggcatcgccgagcggatacgggatccccattttgcttctcct
gcactatacgtatacgataaatatcccggaggatcaggactcagtgcgactctggtggga
aaactcccggaaatacttcgggcatcccttgagcttgtggaaaactgtccctgtgaggaa
ggctgtccttcctgcatcggcccccggctgaaagatgaagagatcggagagaaccccaag
cccatggtaattcagtttatctcccgctggatggaagccaccggcagctga
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