KEGG   Salinispira pacifica: L21SP2_1335
Entry
L21SP2_1335       CDS       T03013                                 
Name
(GenBank) Hydrolase (HAD superfamily)
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
slr  Salinispira pacifica
Pathway
slr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:slr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    L21SP2_1335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slr03019]
    L21SP2_1335
Messenger RNA biogenesis [BR:slr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     L21SP2_1335
SSDB
Motif
Pfam: HD KH_1 RNase_Y_N HDOD KH_KhpA-B KH_2 Cas3_HD KH-I_KHDC4-BBP dUTPase
Other DBs
NCBI-ProteinID: AHC14734
UniProt: V5WGQ3
LinkDB
Position
1407085..1408176
AA seq 363 aa
MIISSLEDEARHDAQALIHKIEQEGQITAERKGREILISTIQRMASEVNAEVTVASVNLP
NDEMKGRIIGREGRNIRTLETLTGVDIIIDDTPEAVVVSCFDPVRKEIARRSLERLISDG
RIHPTRIEEVVQKVTQEISQYIFEEGEKVLFDLGIHHMKPEGIRGIGRLVFRTSYGQNVL
AHSKEVAVFAGMIAAEVGADTEIARRAGLLHDVGKGIESDGDSNHVELGVELAKRTGEDE
RVINAIASHHGDVPHSCVESVIVQIADALSASRPGARRETLDNYIKRLENLEKIAEDFDG
VDKAYAIQAGRELRIMVDHEKVSDNEAREIAREIAKRIEAELRYPGRIKVTMIRETRIVE
YAR
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgattatctcatcactggaggatgaagcccggcacgacgcccaggctctcatccataag
atcgaacaggaaggtcagatcacagctgagcgtaagggacgggagatactcatctccaca
atccagcgcatggccagtgaggtgaatgcggaagtaaccgtcgcatcagtgaatcttccc
aacgatgaaatgaagggccgcattatcggcagggaagggcgaaacatcagaaccctggaa
accctgaccggagtggatatcattatcgatgatactcccgaagcggtggttgtttcatgt
ttcgatcctgtgcggaaagagatcgcccggcggagccttgaacggctcatcagcgacgga
cgaatccatcccaccaggattgaagaagtggttcagaaggtaacccaggagatcagtcag
tacatctttgaagaaggtgaaaaggttctgtttgatctgggcatccatcatatgaaaccc
gaaggtatccggggaatcgggcggctggtgttcagaaccagttacggacagaatgtgctg
gcccattccaaggaagtggccgtgtttgcaggcatgatcgccgctgaagtgggtgcggat
actgaaattgcacggagagcaggtttgctccacgacgtgggcaaaggaatcgagtctgac
ggtgattccaaccatgttgaactgggtgttgagcttgccaagcgcaccggtgaggatgag
cgggtcattaacgccatcgcatcccaccacggagatgtacctcacagctgcgtagagtcg
gtgattgtacagattgcggatgcgctgagcgcttcccgccccggtgcacgccgggagacg
ctggataactatattaagcgtcttgagaatcttgaaaagattgccgaggattttgacggc
gtggataaggcatatgccatccaggccggccgggaattgcggatcatggttgaccatgaa
aaggtcagcgataatgaggcccgggaaattgcccgtgaaattgccaaacggattgaagct
gaacttcgctatccggggcggatcaaggtaacaatgattcgtgaaacccgaattgtggag
tacgcacgctga

DBGET integrated database retrieval system