Salinispira pacifica: L21SP2_1539
Help
Entry
L21SP2_1539 CDS
T03013
Name
(GenBank) Transcriptional regulator, LysR family
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
slr
Salinispira pacifica
Brite
KEGG Orthology (KO) [BR:
slr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slr03000
]
L21SP2_1539
Transcription factors [BR:
slr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
L21SP2_1539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AHC14932
UniProt:
V5WGH2
LinkDB
All DBs
Position
complement(1632017..1632889)
Genome browser
AA seq
290 aa
AA seq
DB search
MSINYNHLRYFWFVAHEGKLNKAAEELNISQSALSVQIKILESQLGHQLFLRQGRQLILS
EAGRLVLDYADSIFKTGEELLHQLTHNHAVERNVFRVGAITTLSRNFQIGFLRPLMGRPE
IELKVLSGSLGYLLQSLENHSIDIALTNHAPIRDSSAPWVSHLISHQPVSLVGDPEKQYQ
TRELKNLLEEEPLLLPSMESNIRMSINALMDRWDVHPTIAAEINDMTMLRLMAREKTALA
VVPPIVVKDELESGSLEEIYRLPDIRETFYAIVPRRRFPNPLVKELVSAG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattaactataatcatctgagatatttctggtttgttgcccatgaagggaagctg
aataaagctgctgaggaactgaatatcagccagtcggcgttatccgttcaaatcaaaata
ctggaatcccagttgggccatcagctttttctccgtcagggaagacaactcattctctcg
gaggccggtcgtctggtacttgattatgctgacagtattttcaagaccggagaagaactt
ttacatcagcttacccataatcatgctgtggaacgaaacgtcttcagggtaggtgcaatt
accactctgtcacggaattttcaaatcgggtttctccgtcctctgatgggccggccggaa
attgagctgaaggtgctttccgggtccctggggtacctacttcagagtctggaaaatcac
agtattgatattgccctcaccaaccatgcccccataagagattcatccgcaccatgggtt
tctcacctgatctcccatcagccggtaagtctggtgggagatccggagaagcagtatcag
acccgggaactaaaaaacctgttggaagaggaacccctgctgctccccagtatggaaagc
aatatccgtatgagcatcaatgccctcatggaccgttgggatgtacatcccaccatcgct
gcggaaataaacgatatgaccatgctgcgcctcatggcaagggagaaaactgctcttgcg
gtagtccctcctattgtggtgaaagatgaactggaatccgggagtctggaagaaatttat
cgcctccctgatatccgtgaaacattttacgcaattgtacccagacgccgatttcccaac
ccgttggtgaaagagttggtttccgccggctga
DBGET
integrated database retrieval system
