Salinispira pacifica: L21SP2_1548
Help
Entry
L21SP2_1548 CDS
T03013
Name
(GenBank) deoxyribodipyrimidine photolyase-like protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
slr
Salinispira pacifica
Brite
KEGG Orthology (KO) [BR:
slr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slr03400
]
L21SP2_1548
Enzymes [BR:
slr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
L21SP2_1548
DNA repair and recombination proteins [BR:
slr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
L21SP2_1548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AHC14941
UniProt:
V5WIE7
LinkDB
All DBs
Position
complement(1639899..1641557)
Genome browser
AA seq
552 aa
AA seq
DB search
MEIEMSERAEHREKPAVNRIRLILGDQLNIHHSWFSRVDDSTLYVMAEQRSETDYTLHHA
QKLIGVLSAMRAFARELESRGHRVRYFRLGDTDNGHSFQDNISRLMQMHGARSFEWQQPD
EYRLEKELESLAESLTVSQADSMADSMADSMADSVADHSSVNTRKFSTEHFISAPEDFDP
MVKDGKIPTMERFYRRMRKKTGILMEDDQPVGGKWNYDSENRSPLKDASDLPSMPYSLRN
EEELWEEICQEGVESFGSPKAAEFYWPETRTQAQKALNDFLANRLENFGIYQDAMVDGEP
FLYHSLISFALNIKLISPGEVIESAVQKWGRKARDDHRVLASLEGFIRQILGWREYMRHV
YRNGMPGYGKLNHFNARRPLPSWYWDGKTSMNCLSKAVSQSLEHGYAHHIQRLMITGNFA
MLAGVDPDQVDFWYLGVYIDAFQWVEITNTRGMSQYADGGKVATKPYAASASYINRMSDY
CKGCSYNKKLRHGENACPFNSLYWHFLHRNRSILADNHRLAMPYRTWDRFDPEEKKAILK
YGDDCLKNIERL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggagattgaaatgagtgaaagggccgaacacagggaaaaacctgcagtaaatcgtatt
cggctgattctgggtgatcagctgaacattcaccattcatggttttcccgggttgatgac
agtacgctctatgttatggctgagcagcggtcagagaccgactacactctgcatcatgcc
cagaaactgatcggcgtcctctctgccatgagggcatttgcccgggagctggaaagcagg
ggacacagggtacggtatttccgcctgggagatacagacaacggccatagctttcaagac
aatatatcccgacttatgcaaatgcatggagcccggagctttgagtggcagcagcccgat
gaataccgtctggaaaaggaacttgaatcgcttgccgaatctctgactgtttctcaggcc
gattctatggccgattctatggccgattccatggccgattccgtggccgatcactcttcc
gtaaataccaggaagttctccaccgagcatttcatttctgccccggaagactttgatccc
atggtaaaggacgggaagatcccaaccatggaacggttttaccgccggatgcgcaagaaa
accggtattctcatggaggatgatcaaccggttggcggaaaatggaattacgacagcgaa
aaccgttcccccttgaaagatgcctctgacctgccctccatgccgtactctttgcgcaat
gaagaggagttgtgggaagaaatctgccaggaaggagttgagagcttcggcagccccaaa
gccgctgaattctactggcccgaaacccgaacccaggcacaaaaggcgttgaatgatttt
cttgccaaccggctggagaacttcggtatctatcaggatgccatggttgacggagaaccg
tttctctaccattcactcatcagttttgccctgaatatcaaactgatatctcccggagaa
gtgattgaatcggcggtacaaaaatggggtcggaaagcccgtgatgatcaccgggtgctt
gctagtcttgagggatttatccggcagattctgggctggagagagtatatgcgccacgtg
taccgtaacggcatgccgggctacgggaaactgaatcatttcaatgcccgccggcccctt
ccctcatggtactgggatggaaaaacctcgatgaactgcctctccaaggcggtcagccag
agccttgagcatgggtacgcccaccacattcagcgtctgatgatcaccggaaatttcgcc
atgcttgcgggggttgatccggaccaggtggacttctggtacctgggggtgtatatcgat
gccttccagtgggtggagattaccaatacccggggaatgagtcagtacgccgacggaggc
aaggttgcaaccaagccctatgccgccagcgcaagctatatcaacagaatgtccgattac
tgcaaaggatgcagctataataaaaaactgcgccacggcgaaaatgcatgcccgttcaac
tctctgtactggcattttcttcatcgaaaccgatccattctggcagacaaccatcgtctg
gcgatgccctaccgtacctgggaccggtttgatcctgaggagaagaaggccattctgaag
tacggggacgactgcctgaagaacatcgagcgattgtga
DBGET
integrated database retrieval system
