Salinispira pacifica: L21SP2_1753
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Entry
L21SP2_1753 CDS
T03013
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
slr
Salinispira pacifica
Brite
KEGG Orthology (KO) [BR:
slr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slr03019
]
L21SP2_1753
03009 Ribosome biogenesis [BR:
slr03009
]
L21SP2_1753
03036 Chromosome and associated proteins [BR:
slr03036
]
L21SP2_1753
Enzymes [BR:
slr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
L21SP2_1753
Messenger RNA biogenesis [BR:
slr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
L21SP2_1753
Ribosome biogenesis [BR:
slr03009
]
Eukaryotic type
90S particles
RNase
L21SP2_1753
Prokaryotic type
rRNA processing factors
L21SP2_1753
Chromosome and associated proteins [BR:
slr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
L21SP2_1753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RNA_pol_Rpb1_3
MobC_2
Motif
Other DBs
NCBI-ProteinID:
AHC15132
UniProt:
V5WH34
LinkDB
All DBs
Position
1859291..1860040
Genome browser
AA seq
249 aa
AA seq
DB search
MIFPKDGEAQRAPLISPERKKELQLFEKHAGTRFRRQDLLNLAFSHRSYANESRSDVANN
EKLEFLGDSVLGLVVAEYLYQLLPEEEEGRLAKIKSFVVSEDSLADIARYLKIDNFILIG
KGEEYSGGRSKKAILADALEAVIGALFLDSGFKSAKKFILKYFVPEINKVLENKHRKDYK
TLLQEYLQKHHKVYPRYQLVKKTGPDHAKVFWMEVQVLEENFGPGKGRNKKEAEQKAAEL
AYRHFHPDT
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
gtgatctttcccaaagacggtgaggctcagcgggctccgctgatttcgccggaacggaaa
aaagaactgcagctgtttgaaaaacatgctggaacaaggttcaggagacaagatcttctg
aaccttgctttttctcaccgctcctacgcgaatgaaagccggtccgatgttgccaataac
gagaagctcgaattccttggggattcggttctcgggcttgtcgtagctgaatatctttat
cagctgctgcctgaagaggaagaggggcggctggcaaagataaaatcctttgtggtttca
gaagacagcctggcggatatcgcacggtatctgaagatcgataattttattctaatcgga
aaaggcgaggaatactccggcgggcgctccaagaaagcgatcctggcggatgctctggaa
gccgttatcggcgcgctttttcttgattcagggtttaaatcagccaagaagtttattctc
aagtactttgttcccgagattaacaaggttctggaaaataaacatcgcaaggattataaa
acccttcttcaggaatatctgcagaaacaccataaagtgtaccccaggtatcagctggtg
aaaaagacaggccccgaccatgcaaaggtattctggatggaagtccaggttctggaggaa
aatttcggccccggaaagggcaggaacaaaaaggaagccgaacaaaaggctgcagaactt
gcgtacagacattttcatccggatacctga
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