Salinispira pacifica: L21SP2_1778
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Entry
L21SP2_1778 CDS
T03013
Name
(GenBank) Penicillin-binding protein 2 (PBP-2)
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
slr
Salinispira pacifica
Pathway
slr00550
Peptidoglycan biosynthesis
slr01100
Metabolic pathways
slr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
slr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
L21SP2_1778
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
L21SP2_1778
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
slr01011
]
L21SP2_1778
Enzymes [BR:
slr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
L21SP2_1778
Peptidoglycan biosynthesis and degradation proteins [BR:
slr01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
L21SP2_1778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AHC15155
UniProt:
V5WHQ8
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Position
1886863..1888869
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AA seq
668 aa
AA seq
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MRKGSGNSGIQQKKLIIIASLMFAVIGLYIIRLFSLQIVDNYVYKAQADQVSRRRQIIPT
RRGEVYDRNFDQPLVTNIDTFAILLDLSKVPSDGLQDLITRLADALNTSETLLWNKIPSS
RNENYALYEIWNGASFHQISAIAERIDLYPGISWESRPTRYYTQGDLMAHVLGYTGEITA
EELQILYNQGYAGAREIGKTGVEKQYDNLLRGEEGIRYGRVDARGRQVQDLEDVPPELGK
SLVLTLDRHVQRLVEDAMGPRIGGAIVMNPKNGEIIAMHSYPDYDPNIFYSAGADSDIQR
LNSDPRAPLLNRTIQAAGSPASTFKTLMSVAMLQEEAFDPQEEIYCPGYVVVGDRTFHCH
DHDGHGYVNMYEALAESCNVYYYTIGKDYLEVEGILDYSLRFGLGDYSGIDLPNEVRGLL
PSPEWKELNYNTPWVGGDTVNLSIGQGFLTVTPLQMANLTAAVVNDGLVYQPHVLKEVRD
QSSLELVDQFEPRILRDIGVDEEVFQEVRKGMEMVISQGTARWVITSDSAQIAGKTGTAE
TGFEEQKHSWFISYVPANPEPGEKQYVVVVWIDAANEWDWWGPKAANIIIHGIMNNMNFE
DAVRDLQPLWYLGIPELERILNPLMPPDNDSGQAFSDGNERTANESTAAGSDVDIPVQEE
PIGEGNDD
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgagaaaggggtccggaaatagcggaattcaacagaaaaaactgattattatcgcttct
ctcatgtttgccgtaataggactctatataatacggctcttttccctgcagatagtggat
aactatgtgtacaaggcccaggctgatcaagtgtcccggcgcagacagattattcccaca
cgcagaggtgaggtgtacgacaggaactttgatcagccccttgttacaaacatcgatact
tttgcaattctactggacctttccaaggttcccagcgacggactgcaggatctgataacc
cggcttgccgacgcgctgaacaccagcgaaacccttctctggaacaagattcccagcagc
cgcaatgaaaactatgccctgtatgagatatggaacggtgccagtttccaccagatttct
gccattgccgagcgaattgatctctaccccgggatcagctgggaatcccggccgacccgc
tattatacccagggagatctgatggcccacgtgctgggctatacaggggagattaccgcc
gaggagctgcagattctctataatcaggggtatgcaggagcccgggaaatcggaaaaacc
ggtgtggaaaaacaatacgataatctgctccggggtgaagaaggcatacgatacggccgg
gtggatgcccggggaaggcaggtgcaggatcttgaggatgtccctccggaactgggaaaa
tccctggttctcaccctggaccggcacgttcaaagactggttgaggatgccatggggccg
cggatcggcggagcaatcgtcatgaacccgaaaaatggtgaaattattgctatgcacagc
tatccggattacgatcccaatattttttattccgccggtgctgattctgatattcaaaga
ctcaattccgatcccagggctccattgctgaaccgcaccatccaggcagcaggaagtccc
gcatccaccttcaagacgctgatgagcgtggccatgctccaggaggaggccttcgatccg
caagaggagatttactgcccgggatacgtggtggtgggtgacaggacattccattgccac
gatcatgacggccacggatatgtgaatatgtacgaagctctggcggaatcgtgcaacgtg
tactactacacaataggcaaagattatctggaagttgaaggcatactcgattattccctt
cgtttcgggctgggagactacagcggaattgatctgcctaatgaagtgagggggcttctc
cccagtcccgagtggaaggagctcaattacaatacgccctgggtcggaggcgatacagtg
aacctttcaatcggtcagggttttcttaccgtcacgcccttgcaaatggcaaatctcacc
gcggcggtggtaaacgacgggctggtgtatcagccccatgtactcaaggaagtacgggat
cagtccagtcttgaactggtggatcagtttgaaccccgcatcctccgggatatcggcgtg
gatgaggaagtatttcaagaggtccgaaaagggatggagatggttatatcccagggtacc
gccaggtgggtaattaccagtgattccgcccagatcgccggcaagaccggcacggcagag
accggatttgaagaacaaaaacactcctggtttatttcctatgtacctgcaaatccggaa
cccggggaaaaacagtacgttgtggtggtctggattgatgccgcaaatgaatgggattgg
tgggggccgaaggcagccaacattattatccatggtatcatgaacaacatgaatttcgag
gatgccgttcgggatctccagcctctgtggtacttgggaatcccggaacttgagcgaata
ctcaatccactcatgccgccggataatgactccggccaggcgttttccgacggtaatgaa
cggactgccaatgaaagcactgccgcagggtccgacgtcgacattccggttcaggaagaa
cccataggggaggggaacgatgattaa
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