Salinispira pacifica: L21SP2_1811
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Entry
L21SP2_1811 CDS
T03013
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
slr
Salinispira pacifica
Brite
KEGG Orthology (KO) [BR:
slr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slr03016
]
L21SP2_1811
Enzymes [BR:
slr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
L21SP2_1811
Transfer RNA biogenesis [BR:
slr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L21SP2_1811
Prokaryotic type
L21SP2_1811
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AHC15186
UniProt:
V5WJ40
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All DBs
Position
complement(1925417..1926235)
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AA seq
272 aa
AA seq
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MDKFASGLMLVFAGQGTRFVQYLSNMDKRYHATIEFGKETETLDPEGEVIATAEIPDGSR
LEEVLSRFRGDLDQVPPKYSAVHVDGQRAYKRSLKGDDFDIPSRRIVIHSLEIRDWNPPR
GDFDIHCSKGTYIRSLARDLGLAAGSRAYVERLQRTTVGEFHLDEALTLDEIREKGGEWV
IDQMICGSDLIRRIPGFQLFQADSDLARRIRLGKDLYFRELGAPLIERSGDSPPQIFAVM
DEYDQLAALFQAGGDIQPQTRLTYRGVFHKLS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
ttggataaattcgcttcgggcctgatgctggtgttcgccggtcagggaacccgctttgtg
caatatctgagcaatatggataagcgctaccacgccaccattgagttcggtaaagaaacg
gaaaccctggatcccgaaggtgaagtgattgccactgcagaaatcccggatggatcacgg
ctggaagaggttctttcacgtttcaggggagatcttgatcaggtcccgccgaaatattcg
gcagtccatgttgacggacagagggcgtacaaacgcagcctgaagggtgatgactttgat
attccttcccgccgtattgttatccactccctggaaatcagagattggaatccgccccgg
ggagattttgacattcactgttcaaaaggaacgtatatccgcagccttgcacgggacctg
gggcttgccgcgggaagccgggcctatgtcgaacggctccagcgtaccaccgtaggagaa
tttcacctggacgaagcgctgaccctggatgaaatccgggagaagggtggtgaatgggtc
attgatcaaatgatctgcggcagtgatcttatccgccgaattcccggttttcagctgttt
caggcagacagcgatcttgcccggcgaattcgtctgggaaaggacctgtacttccgggag
cttggagccccattgatcgaaagaagcggcgattcgccgcctcagatttttgccgtgatg
gatgagtatgatcagcttgcagcactgttccaggccggcggagatattcagccccagacc
cggctgacgtatcggggagtgtttcacaagctctcgtaa
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