Salinispira pacifica: L21SP2_1819
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Entry
L21SP2_1819 CDS
T03013
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
slr
Salinispira pacifica
Pathway
slr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
L21SP2_1819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slr03400
]
L21SP2_1819
DNA repair and recombination proteins [BR:
slr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
L21SP2_1819
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Paralog
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Motif
Pfam:
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
AHC15194
UniProt:
V5WI23
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Position
complement(1933248..1935137)
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AA seq
629 aa
AA seq
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MMQQYERIKSSHRDKILFFRLGDFYEMFKTDAKEASRVLGLTLTARNGIPMCGIPFHAAS
SYIPKLLEAGKKVAICEQTKMPEGGKGIAERQVVEILTPGTVFDEEFLKTGDHNFIASFS
ASESDPGRLSFSCIDVSTGNLILNSFASADMKSGLLRELARYNPREILIQETLFQSYPWL
NQELGRSSLIINRFPDWHYSGSNGYGLLCDIMSLQNLKSYGLEPSNPELDSLSPLLQYVE
ENAGRKIRHINSLRVVQDDDHMLIDNNSQKNLELIRNTSDGSENQSLFTIINQTRTSMGR
RLLKQWILEPLVDVSEIRRRQDFVELLYHDQLLLNRCRDILGKALDLPRLSARVAMEKAH
PKDMKAIQNSLHSQLNLYELLHHSPLAEIFNAGSIPELKRAADMIGDAILDDPPTQINEG
GIIRRGYDALVDELTDTESNAQDLLDAYLAREKELSGIGNLKIKFNKVVGYFLEVSKAQV
KNIPCHFEPRQSLVNADRYTTAELQELAQRISSSRDQRMQREQELFIQLRNKVGEQLPVL
QEAGEILAALDCIQSFAYQATLKGYTRPEMIEKQLMEIQGGGIRWWKHFWKTPPLFPTTP
GSAETATIIFISSPVRIWPEKVRSCGKTP
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcagtacgaacggattaaatccagccacagagacaagatacttttctttcgt
cttggtgatttttatgaaatgtttaaaacagatgcaaaagaggccagcagagttcttggc
ctgaccctgactgcccggaacgggattcccatgtgcggaattccctttcatgctgccagt
tcctatattcccaagctgcttgaagccggtaaaaaggttgccatttgcgagcagacgaaa
atgcctgagggagggaagggtatcgcagaacgtcaggtcgtggagatcctgacgccgggt
acagtttttgacgaagagtttctgaagaccggcgaccacaattttattgccagtttctcc
gcatcagaatcagatcccggtcgtttaagcttttcatgcatcgacgtttccacgggaaat
ctgattcttaacagtttcgcttccgctgatatgaaaagcggtctcttgagagaactggcc
cggtacaatccccgtgaaatactgattcaggaaactctttttcaatcctacccctggctg
aaccaagagcttgggcgaagcagtctcatcattaatcgctttccggactggcattacagc
ggttccaacggatacggtctcctctgcgatatcatgtcacttcagaatttgaaatcctac
ggccttgaaccttccaatcccgagcttgattcactgagcccgcttctccagtatgtggag
gaaaacgccggcagaaagatccgccacatcaattctctcagggttgtccaggatgatgat
cacatgctcatcgataataattcccagaaaaatctggaattgattcggaatacctcagac
ggcagtgagaatcagagtttgtttaccattatcaatcagacccgaacctccatggggcga
cggcttctcaagcaatggattctcgaaccccttgttgatgtatcagaaatcagacggaga
caggattttgttgagctgctttaccatgatcaactgctcctgaaccgttgccgggatatt
ctcgggaaggcacttgatctgccgcgcctctctgcccgggtagccatggagaaagcccat
cctaaagatatgaaggcgatccaaaactcacttcacagtcagctgaatctgtacgaactg
ctgcatcacagtcccctggccgaaatatttaatgccggttccataccggagctgaagcgg
gcggcggatatgatcggcgatgcaattcttgatgatcctcccacccaaatcaatgagggt
gggatcattcgccggggatatgatgcgctggttgacgaactgacagacacggagtctaac
gcccaggatttgctggatgcatatcttgcaagagaaaaagagctcagcggaattggaaac
ctgaaaattaaattcaacaaggtggtgggatattttctggaggtgtccaaggcccaggta
aaaaatatcccgtgtcattttgaaccccgccagagtctggtgaatgccgacagatatacc
accgctgaactgcaggagcttgcgcagcgaataagcagctcccgggaccagcgtatgcag
agggagcaggaactttttattcagctcagaaacaaggttggggagcagctgccggtcctt
caggaggccggggaaattcttgcggctcttgactgtatccaaagttttgcatatcaggcc
actctgaaagggtacacccgccctgaaatgatcgaaaagcagttaatggaaattcagggg
ggcggcatccggtggtggaagcatttctggaaaactccgcctttgttcccaacgacaccc
ggatcagcggaaacggcgacgattattttcatctcatcaccggtccgaatatggccggaa
aaagtacgttcctgcggcaaaacgccttga
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