Salinispira pacifica: L21SP2_1900
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Entry
L21SP2_1900 CDS
T03013
Name
(GenBank) Geranylgeranyl diphosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
slr
Salinispira pacifica
Pathway
slr00900
Terpenoid backbone biosynthesis
slr00997
Biosynthesis of various other secondary metabolites
slr01100
Metabolic pathways
slr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
slr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
L21SP2_1900
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
L21SP2_1900
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
slr01006
]
L21SP2_1900
Enzymes [BR:
slr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
L21SP2_1900
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
L21SP2_1900
2.5.1.29 geranylgeranyl diphosphate synthase
L21SP2_1900
Prenyltransferases [BR:
slr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
L21SP2_1900
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF6779
Motif
Other DBs
NCBI-ProteinID:
AHC15273
UniProt:
V5WHI3
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All DBs
Position
complement(2024861..2025925)
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AA seq
354 aa
AA seq
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MNELYSRKDEIEGKITRHTREFLEKFGHVSSFSSQLVTRLTDFALRGKHIRGSLVPFTYA
LLPGREVSFDAITDVAAALEILQSMLLIHDDIMDQDELRRGKAAIHALYMNDGRTLGVTD
PAHYGESLGICAGDVATFLAMRIVASMEADDGLVRSVERFIADELMLVGLSQMQDVHHGQ
IDGSMVGYDDIIRTYRYKTGRYTFSLPMSLAGLLRGSSHDIRQILEKTGELIGIIFQIKD
DELGLFGNPESTGKPNDSDLREGKKTVYVQLLRDLLKDEQRKKLDRILQEYRGPADQEWV
LDLMNTHGIREQVEADLLRYRKEIDDILSSLPEEVAELRQGLEKLTDYNMSRSR
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactgtacagccgcaaggatgagatcgaagggaaaatcacccgccacacccgg
gagtttctggaaaaattcggccatgtcagttcgttcagttcccagcttgtcacccgactt
acggactttgcattgaggggaaagcatataaggggcagccttgttccgttcacttatgca
ttactccccggccgggaggtctcctttgatgcaattacggatgtcgccgccgcccttgaa
attctccagagcatgctgctgattcacgatgatattatggatcaggatgaattgcgcagg
gggaaagcagccattcatgcattgtacatgaatgacggtagaacattgggtgtaacagat
cccgcccattacggcgaaagcctgggaatatgcgccggtgatgttgccaccttcctggca
atgcgaattgtagcctccatggaggccgatgatggccttgtcaggtccgtggagcggttt
attgccgatgagctgatgctggtgggcctctctcagatgcaggatgtgcatcacgggcag
atagacggttcaatggtaggctatgatgatattatccgtacctacaggtataagacaggt
cgatatacgttttcacttccaatgagtctggccggacttcttcggggcagcagccatgat
atcaggcaaattctggaaaaaaccggcgaactgatcggtattatttttcagatcaaggat
gatgaactggggctgttcgggaatcccgagagcaccggaaaacccaatgactcggatctt
cgggaaggcaagaaaaccgtctatgttcagctgctgagggatctcttgaaggatgaacaa
cggaaaaaactggacagaattcttcaggagtaccgcggtccggctgatcaggaatgggtg
ctggatttgatgaacacccacgggatcagagaacaggtggaagcagatctcctcaggtac
agaaaggaaatcgatgatattctttcatctcttcctgaagaggttgccgaactccgccag
gggctggagaagctgactgactacaacatgtcccgatcccgctga
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