Salinispira pacifica: L21SP2_2152
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Entry
L21SP2_2152 CDS
T03013
Name
(GenBank) Exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
slr
Salinispira pacifica
Brite
KEGG Orthology (KO) [BR:
slr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slr03400
]
L21SP2_2152
DNA repair and recombination proteins [BR:
slr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L21SP2_2152
Archaeal homologous recombinant proteins
L21SP2_2152
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
UPF0181
Oxidored_q6
Motif
Other DBs
NCBI-ProteinID:
AHC15519
UniProt:
V5WJ12
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Position
2302544..2303713
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AA seq
389 aa
AA seq
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MKILHTADWHLGKILHDHSLLEHQEAILKKILDLGSDGSYDAMIIAGDIYDRSIPPGEAM
ALMSRFLRDFRRRCATPVLIIAGNHDSRSRLAYLAELLEDKDIHIRSSDADIHVPVIIGN
AHFWLIPFLDPDISPADEDGLNAHERPLQRAVERIQAVMDRSKLNIAVAHCFTTGGESSD
SERVFVGGSGEVSAELFHMFDYTALGHLHRSQFPGPGIAYSGSPLKYSFSESDDAKCVLS
ADVEKAGVNISPIALTPPRDLRRLTGSLKDLLENPEFKDAENDYVEIELDYIPPGLNPLE
HLRQRFPHLFSIRKALPSSMHSPGPGGEVPGDTADGLTGGESELRGRDIQSDFASFYSRL
HPDSPEIPAGKLEIFHSELQALRNEKGDE
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcttcacactgccgattggcatctcggcaaaattctccatgaccattccctt
ctggaacatcaggaagccattctcaagaagattctggacctcgggagcgacggcagctac
gatgcgatgattatcgcaggggatatttatgaccgcagcatcccccccggggaagcaatg
gctctgatgagccgtttcctccgggatttccgacggcgctgcgccacacccgtattgatt
atcgccggaaatcatgacagccgctccagactcgcctatcttgcagaacttctggaagac
aaggatattcatatcagaagcagcgatgcagatattcatgtgccggtgataatcggaaac
gcacatttctggctcattccgttcctggatccggatatttctcctgcggacgaagacggg
ctcaacgcccatgaaagacctttgcaacgggccgtagaaagaatccaagctgtgatggat
cggtcaaaactcaatattgctgtcgcccactgtttcacaacagggggtgagagctccgat
tctgagagggtttttgtgggcggaagcggggaggtttctgcggagctgtttcacatgttc
gattatacagccctgggtcatctgcatcgcagtcagttccccggccccgggatagcctat
tccggatctcccctgaagtattccttctccgaatccgacgatgccaagtgtgttctcagc
gccgatgtggagaaagcgggagtgaacatcagtcccatcgcccttactccccccagggat
ttacgccggctcaccggcagcctgaaggatcttctggaaaatcccgagttcaaggatgcg
gaaaacgattacgtggaaatagaactggactacattcccccggggctgaatcccctggaa
catttgagacagcgctttccccatcttttcagtatcagaaaagcactgccttcgtccatg
cattccccggggcccggcggggaagtcccgggtgatacggcggacggcctgaccggcggg
gaatctgaactgcgggggagggatatccagtcggactttgcatccttttactccaggctt
catcccgactctccggaaatcccggcgggaaagctggaaatttttcacagcgagcttcaa
gcccttcgaaatgaaaagggggatgaatga
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