Salinispira pacifica: L21SP2_2387
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Entry
L21SP2_2387 CDS
T03013
Name
(GenBank) Xylose ABC transporter, periplasmic xylose-binding protein XylF
KO
K10543
D-xylose transport system substrate-binding protein
Organism
slr
Salinispira pacifica
Pathway
slr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
slr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
L21SP2_2387
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slr02000
]
L21SP2_2387
Transporters [BR:
slr02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
L21SP2_2387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
AHC15740
UniProt:
V5WJC7
LinkDB
All DBs
Position
complement(2559671..2560657)
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AA seq
328 aa
AA seq
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MLFGSCSEGGDSQRSHGRLIKIGFSLDSVVVERWERDREEFITHARSLGAEVNYRFAVAD
ARKQVEDINELLDDGVDALVVVPNDAQALQGVLKRAANMDVPVISYDRLILDSPVSAYVS
FDNVEVGRLMAEGMIKHAGFDSRVLIINGGAKDNNSRLLRRGIAEVLSPYINRGMIRIAG
EITPDDWYTSLIEDDLEEYIREEKLDGIIAANDLFADSAIQILARYRQAGDVVVVGQDAD
LIACQRLVEGIQHRTIYKPIDRLARQAAETAFNLAVGEKLHSSRTVDNGYARIPAVIVEP
VAVEKDNLEETVIADGFHTREEVYRNRE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgctctttggatcctgcagcgaaggaggcgactcccagagaagtcatggacgacttatc
aagatcggcttttccctggattcggtggtggtggaacgctgggagcgggaccgggaggag
tttattacccatgccagaagtcttggagccgaggtgaattaccgttttgccgtggccgat
gcccggaagcaggtggaagatattaacgagctcctggatgacggagtggatgctctggtg
gtggttcccaatgatgcccaggctctccagggagttttgaaacgggctgccaacatggat
gtgccggttatttcctatgacagactcatccttgattctcctgtgtcagcttacgtgagt
ttcgacaacgtagaggtgggaagactgatggccgagggaatgattaaacacgccggattt
gacagcagggtgctgatcatcaacggtggagccaaagataataattcccggcttctgcgc
cggggcatagccgaggtgctcagtccctatatcaaccggggaatgatccgcatagcgggg
gagatcacccccgatgactggtacacatctctcattgaagatgatctggaagaatatatc
cgggaagagaaactggacgggatcatcgccgccaacgatcttttcgccgacagcgccatc
cagattctggcccgctaccgtcaggccggcgatgtggtggtggtgggtcaggatgcagac
cttattgcatgtcagcgtctggttgaaggaattcagcaccgtaccatctataagcccatt
gaccggcttgcacggcaggctgcggaaactgcgttcaaccttgccgtgggagaaaagctt
cacagcagccgaacggtggataacggatacgccagaattcccgctgttattgtagaaccg
gtggcggtggaaaaagacaatctggaagaaacggtaatcgccgacgggttccacacccgg
gaagaggtgtaccggaacagggagtag
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integrated database retrieval system
