Salinispira pacifica: L21SP2_2475
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Entry
L21SP2_2475 CDS
T03013
Name
(GenBank) Dipeptide-binding ABC transporter, periplasmic substrate-binding component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
slr
Salinispira pacifica
Pathway
slr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
slr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L21SP2_2475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slr02000
]
L21SP2_2475
Transporters [BR:
slr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
L21SP2_2475
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AHC15828
UniProt:
V5WJ66
LinkDB
All DBs
Position
complement(2645487..2647034)
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AA seq
515 aa
AA seq
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MSRHTLPKSIYSQSVGLLGILVFSLILAVSCQGGGEEAPLEVSLALSGNPSTLDPHATTE
TLTFQVTKSLYDTLLEPDDDGELVPALARSWSVSDSQKEITFQLRRDVSFHDGSGFDARD
AAASIERLLSPDFASPSAGEYSVIEDVQIVDDFTLRLILSEPNAPLLYTLASGWSAILPS
EKIESGHNFAREPVGTGPFSLEQWVADERITLNKNGDYWMEDEIEVEKVSLQIIPEPSVQ
TQALMSGQVDILYIVSEEDVPVLQSRDDIIVETDTTSLVMVMSINTSRDILGEVEMRRAL
NHAIDKQTALDVAYGGGTPVGTFNDASNPFYADFTGMYPYDPERAAELAREAGYSEDRVF
DLVLPQNFAPHVTAGELYQEMLREAGIQARIRMVDWPTWISDVYGNANYDLTVIGHTGKL
DPDGRFIGYGSGNMYVRYPNELLEELITEGRRTLEFSRRQEIYTQVQRIFAEQVPFVFVG
SSLRRIAYSSDISGFRMTPNLDTFDFRRISSGSGE
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcatacattaccaaaaagcatttactctcagagtgtagggctgctgggtatt
cttgttttttcattgatactggccgtttcctgccaaggcggaggcgaagaagcgcccctt
gaggtaagtctggccctgtcgggaaatccgtctactctggatccccacgcaaccaccgaa
acccttacatttcaggtgacgaaaagtttatacgataccctccttgaaccggatgatgac
ggggagctcgttcccgctctggcccggtcatggtcggtttcggattctcagaaggaaatt
acctttcagctgcgccgtgatgtcagcttccatgatggaagcggctttgatgcccgggat
gctgcggcatccattgagcgtctgctctccccggattttgcatctcccagtgcaggggag
tactcggtaattgaggatgttcagatcgtggatgatttcaccctgcggctgatcctctcc
gaacccaatgcaccgctgctttatactctcgcaagcggctggtccgccattctgccatcg
gaaaagatcgagtccgggcataattttgccagagaaccggttggaaccggccccttttcc
ctggaacagtgggttgccgatgagcgcattacgctgaataaaaacggcgactactggatg
gaggatgaaattgaggttgaaaaggtgagcctccagattattcccgaaccttccgtacaa
acccaggctctgatgagcggtcaggtggatatcctctacatcgtcagtgaagaggacgtt
ccggtgctccagtcccgggacgatattattgtggaaaccgacaccacttctctggttatg
gtgatgtccatcaacaccagcagggatattctcggcgaggtggaaatgcgccgtgccctg
aatcatgccatcgataaacagacagccctggatgtggcctacggcgggggaactcccgtg
ggaacctttaacgatgcttccaatcccttctatgcggactttaccggtatgtatccctat
gatccggaaagagcggcggagcttgccagggaagcgggctacagtgaagacagggttttc
gacctggttcttccccagaacttcgcaccccatgtgaccgccggcgagctgtaccaggag
atgctgagagaagcgggcatccaggcccggatccgcatggtggactggcccacctggatc
tccgacgtgtacggaaatgccaactacgacctcacagttatcggtcataccgggaagctg
gatcccgacggacgcttcataggctacggttcgggcaacatgtatgtacgctaccccaat
gaactcctggaggaactgatcacagaggggcgccggacgctggagttctcccgcagacag
gagatttatactcaggtccaacgtattttcgccgaacaggttccctttgtttttgtggga
agttctctgcgccgcattgcctacagcagcgatatatcaggattcaggatgactccgaat
cttgataccttcgatttccgccgaatatccagcggaagcggcgagtaa
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