Salinispira pacifica: L21SP2_2480
Help
Entry
L21SP2_2480 CDS
T03013
Name
(GenBank) Sigma-54 dependent DNA-binding response regulator
Organism
slr
Salinispira pacifica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_23
HTH_28
AAA_16
Mg_chelatase
VpsR
HTH_3
Xre-like-HTH
AAA
HTH_29
AAA_7
HTH_Tnp_1
P22_Cro
CBS
AAA_22
HTH_1
DUF2007
YdaS_toxin
Motif
Other DBs
NCBI-ProteinID:
AHC15833
UniProt:
V5WJ72
LinkDB
All DBs
Position
complement(2650643..2652076)
Genome browser
AA seq
477 aa
AA seq
DB search
MTRNILVVDDEHTSVELYSMILREHGYDRVIPCEDSRNAAGLIREHDIELVISDLMMPVM
DGYDLLLKINEEHPDIAVIILTAQDKVETAVECMKIGAFDFITKPLDPERLLTAVEHAFT
IRELKEEVNILSTERPDRELSHPGAFSEILTRSPKMKKIFAYMEAIIPSPKPLLITGESG
TGKELIARAFHELANSGGDFVAINVSGLDDAVFSDSLFGHHNPDAAEGGDGRKGLIEQAG
KGTLFLDEIGDLGMNSQIKLLRLLQEGEFFPLGSDTPVPCRARIVAATNANLKSRQESGD
FRRDLYYRLIAHHIELPPLRDRTDDIPLLLDAFLAEALEKMGRPEVKAPPELYAMLKTYP
FPGNVRELQGLMYDMVTASAPGSLDISVIRNYILLNRAGEDGDGSSELSELMDDEQYARG
PGGMLLRKDKMPNMKDAEEFLYEQALERAGGNQSRAAKLLDVSQSTLSRWKQQFSPE
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgacccggaatattctcgttgttgatgacgaacataccagtgtggaattgtactccatg
attctcagggaacacggctatgatcgggttataccctgtgaagacagccggaatgcggcc
ggtctgattcgggaacatgacatcgagctggtgatcagcgacctgatgatgccggtgatg
gacggctatgatctccttttgaaaatcaacgaggaacatcctgatatagcggttattatt
ctcaccgcccaggataaggtggaaactgcagttgagtgtatgaagattggagccttcgat
tttattaccaaaccgctggatcccgagagactgctcactgcggttgagcatgcatttacc
attcgggaactcaaagaggaagtgaatatcctctcaacagagcgtcccgaccgggaactc
tcccaccccggggctttttcggaaatcctcacccgcagcccgaaaatgaaaaaaatattc
gcgtatatggaggcgatcatcccgagtccgaaacccctgctgataaccggagagagcggt
acgggcaaagaactgatagcccgggccttccatgaacttgcaaattccgggggggatttc
gtggcaattaatgtatccggcctggatgatgcggtattcagcgattccctcttcgggcat
cacaacccggatgcagcggaaggaggggacgggcggaaaggtttgattgaacaggccgga
aaaggcacgttattcctggatgagatcggtgatctgggtatgaacagccagattaaactg
cttcgcctgcttcaggagggtgaattcttccccctgggatcggatacaccggttccctgc
cgggcaaggattgtggccgccacaaatgcgaatctgaaatcccggcaggaatcaggcgat
tttcgcagagacctgtattaccggctgatcgcccatcatatcgaactgccgccgctgcgg
gacagaactgatgatatccctttgctgctggatgcctttcttgcagaggctcttgaaaaa
atgggccggccggaggtaaaggcgccgccggaactctacgccatgttgaagacctacccg
tttcccggaaatgtccgggagctgcagggcttaatgtatgacatggtaactgccagcgcc
cctggttccctggatatctctgtaatccgaaattatattctgctgaacagggcaggggaa
gacggtgacggttcctctgaattatcggaacttatggacgatgaacagtatgcccggggg
cccgggggcatgcttctcagaaaggataaaatgcccaatatgaaggatgcagaggagttt
ctgtacgaacaggctcttgaacgtgcaggggggaatcagagccgggctgcgaaactgctg
gatgtatcccagtctaccctcagccggtggaagcagcaattcagcccggagtga
DBGET
integrated database retrieval system
