Salinispira pacifica: L21SP2_2618
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Entry
L21SP2_2618 CDS
T03013
Name
(GenBank) MiaB family protein, possibly involved in tRNA or rRNA modification
KO
K18707
threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:
2.8.4.5
]
Organism
slr
Salinispira pacifica
Brite
KEGG Orthology (KO) [BR:
slr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slr03016
]
L21SP2_2618
Enzymes [BR:
slr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
L21SP2_2618
Transfer RNA biogenesis [BR:
slr03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
L21SP2_2618
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GFIT
Motif
Pfam:
Radical_SAM
UPF0004
Motif
Other DBs
NCBI-ProteinID:
AHC15970
UniProt:
V5WJY5
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Position
2805004..2806551
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AA seq
515 aa
AA seq
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MHDVREQDVKPRKVQADTGAFTPAAPVESGSVSVDASKGDSRNTDRPTVSFNTLGCKLNQ
YETDALAARFMREGWEVVPFSQKADVSVVNSCTVTNKADRKTRNTINKALRLNGKTAHID
LPEAADPGDSGMVVVTGCFVDSHRDELEKDGRSFVVDNDRKNSIFELVQAHRNGEILHPE
SLKGDRFQYDASSRVFHTRGMVKIQDGCDNFCTFCIIPFVRGRAVSRPPEDIFSSAQQMI
DDGYHELVLTGVNMSRYRHGDFVFADIIQGLLDLNGDYRLRISSIEPDQLDERFLELMNH
PRMCPHLHLCLQSGSEKILLKMRRQYSYAEYREIAARLKEHRPDFNITTDIIIGFPGEGT
AEFQESLDAVTSIGFGHVHAFKYSVREGTRAARMDEQVPEKEKNRRSEQLRLEAEKAKRA
YRQGLVGSSQRVLVEKVSAGKDEDGNTRYRARGLGQHYVPVSFPLPPGIGKSRAKAFENR
FARVETTGLDAGDDPDLLGELVYSLEDSASSSGKE
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtgcatgatgtaagagagcaggatgtaaaaccccggaaggtgcaggcagataccggcgca
tttacccccgccgctcctgttgaatccggatccgtttcggttgatgcctcgaaaggtgac
tcccggaatacagacaggcccacagtttccttcaacaccctggggtgcaagctgaaccaa
tatgaaaccgatgcccttgccgcccggttcatgcgggaaggatgggaagttgtacccttt
tcacagaaggccgatgtaagtgtggtaaacagctgcacggtgaccaacaaggccgaccgg
aaaacccggaacaccatcaacaaggccctgagactcaacggcaaaaccgcccatatcgat
ctgcctgaggcagcagatcccggagactccggcatggtggtggtcacgggctgctttgta
gacagtcaccgggatgagcttgaaaaagacggccgcagtttcgtggtggacaacgacaga
aagaactccatttttgaactggttcaggcccatagaaacggggaaattctccatcccgaa
tccctgaaaggggaccgctttcaatatgacgcttccagccgggtgtttcacacccgggga
atggtgaaaattcaggacggctgcgacaacttctgtaccttctgcatcatcccctttgtt
cgaggccgtgcagtaagccggccgcccgaagacatattcagctccgcacagcagatgatt
gatgacggatatcatgagctggtgctcacaggtgtgaacatgagccgctaccgccacggc
gattttgtattcgccgacataatccagggcctgctggacctcaacggggattaccggctg
cgaatctcaagtatcgagccggatcagctggatgagcgcttcctggaacttatgaaccac
cccaggatgtgcccccatctgcacctctgcctccaaagcggatcggaaaaaatccttctg
aaaatgcggaggcagtacagctatgccgaataccgggagattgcagcccggctgaaggaa
catcggcctgattttaatatcaccacggatattattatcggatttcccggagaagggacc
gccgagttccaggaaagcctggatgcggtaacatccatcggtttcggacatgtacatgcg
ttcaaatactctgtacgggaaggaacccgggccgccagaatggatgagcaggttccggag
aaagaaaagaaccgccgttccgaacaactccgcctggaggccgaaaaagccaaaagagcg
taccgccagggactggtgggcagcagtcagcgggtactggtagagaaggtaagcgccggg
aaagatgaagacggcaatacccgataccgtgcacggggccttggccagcattatgttccg
gtgagctttcccctgcccccggggatcggaaaatcaagggctaaagcatttgaaaaccgc
ttcgcccgggttgaaactaccggtctggatgccggggacgatccggatctcctgggcgag
ctggtttattccctggaagactcagcttcttcgtccggaaaagaatga
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