Salinispira pacifica: L21SP2_2939
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Entry
L21SP2_2939 CDS
T03013
Name
(GenBank) Snf2 family protein
Organism
slr
Salinispira pacifica
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
SWIM
HDA2-3
SWI2_SNF2
DEAD_2
Motif
Other DBs
NCBI-ProteinID:
AHC16285
UniProt:
V5WKW3
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Position
complement(3163057..3165879)
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AA seq
940 aa
AA seq
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MSLKTLHISQSGRILQRGDLQRSLRILRNHQIMPPYTTGHGIAADIFDDSGRQFEVELDF
YDGDLIPGCSCGNGGFCVHTSALLIRAAIDGLIPGMDESRINDFREVLEGRGGTGTMGSS
TEADLFQEDLFSFPASPSPHHVSESGSRATAADRAEPSGYPGGRSGGDSVENTADQSDEE
STEKSTEKSTEKSTEKSTEKSADGIVADADPAGPAGEHSPAPDFSDLRQGDEGVRPLLRI
EQNSGGTGIQLFFRYGDAEVSYRSAAKKQSPYTGSDESDQEGIVRDLEFEERFFTRLKEL
INPDLVYERGIYADLFKDGPAHDFQIDRDVADFLIHRGRALLDENIPVLVENRPVYSRGE
LSLSIENDLDMLGIKVSALTPGGKHNIQHSSDADIPGLLSTSSAYVILKERDLKQLEYLK
RRGMDTRGVLQTSSLNMVLLDRIYSQLDTGDQEQLRHVLEMKNLLEDVSRIPLCDQPAGL
KTELRTYQHYGYSWLEYMVSNGMNPCLADDMGLGKTLQTLSLLLRRKEMSQLGTALIITP
VVTMANWAAEARRFAPSLSIMRHEGGGRARDAAELREYDVVLVSYQTLRNDLSVLLDETW
NFVILDEAHYIKNIQSQVFKAVRSLKSRHRVSLTGTPIENSVMELFAQMDFLNPGVLGSP
RKFYGQFFRGIQREGDENLLDELKELVRPFILRRTKDEVLGELPGKEVIVRYVEMEDEQR
RMYDEARLRLMEEIQQESDARLKGSLMFQSLLRLRQLAIHPPLADPAYRGVGSAKMDALR
LLMSDILSEDHKVLIFSQFIGSLETIAGLCREEGWKHVLLTGKTRERDQEVQRFQNDPDT
RVFLLSLKAGGVGINLTAADSVIIFDPWWNPAAEQQAIDRAHRMGQTKNVSAFKLIVKES
IEEKILMLQQQKSTLADEIINGGGSLLSHLSREEMMELFR
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
gtgtctctaaaaactcttcatatatctcaatcaggcaggattctgcagaggggagacctt
cagcggagtcttcgcatactgcgtaatcatcaaattatgcctccatataccaccggacac
ggcatagcagcggatatttttgatgactcgggcaggcagtttgaagtcgagctcgatttt
tacgacggggatttgataccgggctgcagctgcggcaacggcggtttctgcgttcatacc
tcggctctgctcatacgtgctgccattgacgggttgatcccgggtatggatgagtcccgg
ataaacgattttagagaagtcctggaaggccggggcggcaccgggacgatgggaagttct
acggaggctgacctgtttcaggaggatctgttttcttttccagcctccccgtccccccac
catgtgtcagaatccggatcacgggcaaccgcggcggacagggccgaaccatccggctat
ccgggtggaagatccgggggagattctgttgaaaataccgctgatcaatctgatgaggaa
tcgactgagaaatcaactgagaaatcaactgagaaatcaactgagaaatcaactgagaaa
tctgcagacggaatcgttgccgatgcagatccggcggggccggcgggcgaacactccccg
gcaccggatttcagcgatctgagacagggtgatgagggtgtccgccctctgctgagaatt
gaacagaacagcggcggcacgggcatacagctgtttttccgttatggagatgcggaagtt
tcgtaccgctctgccgcgaaaaagcagagtccgtataccgggtctgatgaatcggaccag
gagggaattgtccgggatctggaatttgaggaacggtttttcacccgcctgaaagaactg
atcaatcccgatctggtgtacgaaagaggaatttatgcagacctgttcaaagacggcccc
gcacatgatttccagatagaccgtgatgttgcggacttcctgatccaccggggcagagct
ctccttgacgagaatatccccgttctggtggaaaaccggccggtgtattccaggggcgaa
ctctccctctctatagaaaacgacctggatatgctggggatcaaggtttcagccctcact
cccggggggaagcacaacattcaacatagttcagatgcggatattcccggtctgctcagt
acctcgtctgcgtatgtgatcctgaaagaacgggatctgaagcaattggagtatctgaag
cggaggggtatggatacccggggtgtgctccagacttcctccctgaatatggtactgctg
gacagaatctattcccagctggatacgggtgatcaggaacagctgcgtcacgtactggaa
atgaagaatctgctggaggatgtgtcccgaatccctctctgtgatcagccggcgggtttg
aaaacagaactccgtacctatcagcattacggatattcatggctggaatacatggtatcc
aatggaatgaacccctgtctggcggatgatatggggctgggaaaaacccttcagacgctc
agtctgctgttacggcggaaagagatgtctcagttgggcacggcactgataattaccccg
gtggttacaatggccaactgggctgcagaggcccgtcgttttgccccctctttgagtatt
atgagacatgaggggggcggaagagcccgggatgcggcggaacttcgggagtacgacgtg
gttcttgtgagctatcagacgctcaggaatgatctttcggtattgctggatgagacatgg
aattttgtcattctggatgaagcccattacattaagaacatacagtcccaggtgttcaag
gcggtccggtctctgaaatcacgccacagagtgagcctgaccggcacacccatagagaac
tcagtaatggaattgttcgcccagatggactttctgaatcccggagttctgggcagtccc
cgcaaattctacggccagtttttccggggaattcagcgggaaggtgatgaaaatcttctg
gatgaactgaaggagcttgtgcgcccttttattctccggcggacgaaagatgaagtattg
ggagaactgcccgggaaagaagtgatagtgcgctatgttgaaatggaggatgaacagcgc
aggatgtacgatgaggcccgtctcaggcttatggaggagattcagcaggagagcgacgcc
cgtctcaaaggaagtctcatgtttcagtccctgctcaggctgagacagcttgccatccac
ccgcctctggcggatccggcgtaccggggggtgggatcggcaaagatggatgccctccgg
ctgcttatgtctgatattctcagtgaagaccataaggtgctgatcttcagtcagtttatc
ggaagcctggaaacaattgccggattatgccgggaagaaggctggaagcatgtgctgctc
acgggaaaaacccgggagcgggaccaggaagtgcagcgctttcagaatgatcctgacacc
cgggtatttcttttaagcctcaaggccggaggcgttggtatcaacctcactgccgccgat
tcggtcattatattcgatccctggtggaatcctgcggcggaacagcaggccatagacagg
gctcaccggatgggccagacgaaaaacgtgagcgcattcaagctcattgtgaaagaaagc
atagaagagaagattctgatgcttcagcagcaaaagagtacccttgcggatgaaattatt
aatggcggcggcagtctgctgagccacctcagcagggaagagatgatggagctgttccgc
tga
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