Salinispira pacifica: L21SP2_2947
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Entry
L21SP2_2947 CDS
T03013
Name
(GenBank) Transcriptional regulator, LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
slr
Salinispira pacifica
Brite
KEGG Orthology (KO) [BR:
slr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slr03000
]
L21SP2_2947
Transcription factors [BR:
slr03000
]
Prokaryotic type
Helix-turn-helix
LacI family
L21SP2_2947
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
TrmB
HTH_7
HTH_23
HTH_26
HTH_3
HTH_IclR
Trp_repressor
Motif
Other DBs
NCBI-ProteinID:
AHC16293
UniProt:
V5WKL4
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Position
3175222..3176223
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AA seq
333 aa
AA seq
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MVKKATIYDVARESGVSISTVSRVLNAPAKVNEGTRKSVLDAISRLSFVPRADAMARARQ
RMNRIAVITPFFTEASFVQRIRGVSQSLNPGEYELIIYTVKSRRQLEEHIDMICAGERVD
AVIILSLNIPPDRIQVLQESGLPLVSVENILPGFSSVAVDNHRGGYLGAGYLMKRGYTLL
AFAGERSFHDFTLESTSQRLRGFLDALEATQTPKVEDFIYMGEIGDNSLIQWFSNLFSRA
VHPQAVLCSSDLIAAKLIQTAGQLGKSIPRDIAILGFDNLDMAEYLNLSTVNQHLDYSGQ
LAGSMLKEILESEGERENQTVFLDLEVVQRGTC
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaaaagcgacaatttatgacgtagcccgggaatcgggagtgagcatcagtacc
gtcagcagggtgctgaacgcaccggccaaggttaacgaaggcaccagaaaatcggttctg
gatgcgatttcccggctctccttcgttccccgggcagacgcaatggccagggccagacag
cggatgaaccggattgcggtaatcacaccctttttcacagaagcatcctttgttcagaga
atccgcggtgtgagtcagagcttgaaccccggggagtacgagctgatcatctatacggtg
aaaagccggcgtcagctggaagagcacatagacatgatctgtgcgggagaacgggtggat
gcggtgattattctgtcattgaatattccgccggaccgtatacaggttctgcaggaatcc
gggctgcctctggtatccgtggaaaacatcctgccgggcttttcctcggtggccgttgat
aatcaccgcggaggatacctgggggccggctacctgatgaagcggggctacacccttctt
gcctttgccggcgaacggtccttccacgacttcaccctggaatcaacatcccagcgcctc
agaggctttctggatgcccttgaggcaacccagactcccaaggtcgaggacttcatctat
atgggggagatcggcgataattctctcatccaatggttcagcaatctcttttccagagca
gtacatccccaggcggttctctgctcctccgacctcatcgcagcgaaattaattcaaacc
gccggacaactgggcaagagcattccccgggacattgcaatcctgggtttcgataacctg
gatatggccgaatatctcaacctgagtacggtgaatcagcacctggattattcggggcag
ctggcaggaagcatgctgaaggaaatcctggaatctgaaggtgaacgggaaaaccagaca
gtttttctggaccttgaagtggttcagcggggaacctgctga
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