Salinispira pacifica: L21SP2_3499
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Entry
L21SP2_3499 CDS
T03013
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
slr
Salinispira pacifica
Pathway
slr03030
DNA replication
slr03430
Mismatch repair
slr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L21SP2_3499
03430 Mismatch repair
L21SP2_3499
03440 Homologous recombination
L21SP2_3499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slr03032
]
L21SP2_3499
03400 DNA repair and recombination proteins [BR:
slr03400
]
L21SP2_3499
Enzymes [BR:
slr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L21SP2_3499
DNA replication proteins [BR:
slr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L21SP2_3499
DNA repair and recombination proteins [BR:
slr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L21SP2_3499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA_5
RuvB_N
AAA_22
AAA_30
AAA_16
AAA_14
AAA_24
DnaX_C
AAA_19
AAA_18
AAA_2
SKA2
SPX
nSTAND3
Dynactin_p22
AAA_28
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AHC16835
UniProt:
V5WMF8
LinkDB
All DBs
Position
complement(3770200..3771876)
Genome browser
AA seq
558 aa
AA seq
DB search
MAYEVTASRKRPRNFDTLVGQEFVTATLLNALKTRRIAHAYLFSGPRGVGKTSTARILAR
ALNCPDESKLGTAEGFDYPGAEEISRGVAMDVIEIDGASNTSVNDVRAIKDEVLFPPQSS
RYKIYIIDEVHMLSNSAFNALLKTIEEPPHYIIFIFATTEIHKVPATIRSRCQQFNFRLI
PIEEIIQLLGEAADEIGIKSDEDALFWIARESTGSMRDAYTLFDQVASFSEGHITLEKIK
EKLGLLGIDELNGFTELIIGQKEKETLEYLDGMFSAGISVEQLIIDLSDYFRGLLFAAQG
VNRDGLLGHPLKSYSEKVVHALKSTQLEKILEMLLQAYRDIRYTVNARLELEILISKITR
ISNYLEPEELVERLHNLKHEIARMPENPSQVVSQSVSRLPDDPTRSAENSLKSQEISSAS
VSGTSDTEDAVSESPAHSPEAVPQQPETGDSQGSPILSDQQWQQLIQRIQEESQTLAATL
SSAVARKQEGEKLTIQFSTAMHAGTARQDVKFIADSIRELFGIHVVIDITHSDIQEEEDQ
EDPDVAMVKKVFRGELLN
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcatatgaagtgacagcaagccggaagagaccccggaattttgatacactggtggga
caggaatttgtaactgccaccctcctgaatgcgctgaagactcggcgcatcgctcatgca
tacctgttctccggtcccagaggggtcgggaaaacatccaccgcccgaattctcgccagg
gctctcaattgtcccgatgaaagcaaactgggaactgccgaaggttttgactatcccggt
gccgaggagatcagcagaggcgtggcaatggatgttatcgaaattgacggtgcatccaat
acctcggtgaatgatgtccgggcaatcaaggacgaggtgcttttccctcctcagagcagc
agatataaaatttatatcatcgacgaagttcatatgctttcaaactctgcatttaatgcg
ctgctgaaaactatcgaggaacctcctcattatatcatcttcatttttgcaaccacagaa
attcataaagtgccggccaccatcaggtcaagatgccagcagtttaatttccggctcata
cccattgaagagatcattcagcttctcggtgaggctgcggatgaaatcggtataaaatcc
gatgaggatgctcttttctggattgcccgggagtccaccggttccatgcgggatgcctac
accctttttgatcaggtcgcctcattctcggaggggcacatcacccttgaaaaaatcaag
gaaaaactgggccttcttggaattgatgaactgaacggatttactgaactgataatcggg
caaaaagaaaaagaaaccctggaataccttgacggcatgttttccgcgggaatttccgtt
gagcagctgattattgatctcagcgattatttccggggactgctgttcgccgcccaggga
gttaaccgggacggcttgttgggacatccgctgaaaagttattcagagaaagttgttcac
gctctcaagtccacgcagttggagaaaattctggagatgcttcttcaggcataccgggat
atcaggtatacggtaaacgcaagacttgagctggaaattcttatcagtaaaatcacccgg
atttccaactacctggaacccgaggagcttgtggaacggcttcacaatctgaagcatgaa
attgcccgcatgcctgaaaacccatcccaggttgtttcacaatcagtctcccggctgccg
gatgatccaacccgttctgcagaaaactccctgaagtctcaggagatctcttcagcctct
gtctccggtacttctgatactgaggacgcagtttccgaatcccctgctcacagccctgag
gctgtccctcagcaaccggaaaccggtgattcccagggttccccgattctcagcgatcaa
cagtggcagcagctcattcaacgtattcaggaagaaagtcaaactctggcagccaccctc
agttctgcggtggcacggaaacaggaaggggagaaactcacaattcagttcagcacggca
atgcatgcggggaccgcccggcaggacgtaaagtttatcgccgacagtattcgggaatta
ttcggaattcatgttgtaattgatattacccatagcgatattcaggaagaagaagatcag
gaagacccggatgtggcaatggtgaaaaaagtattccggggagaacttctgaactga
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