Salinispira pacifica: L21SP2_3506
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Entry
L21SP2_3506 CDS
T03013
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
slr
Salinispira pacifica
Brite
KEGG Orthology (KO) [BR:
slr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slr03032
]
L21SP2_3506
03400 DNA repair and recombination proteins [BR:
slr03400
]
L21SP2_3506
Enzymes [BR:
slr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
L21SP2_3506
DNA replication proteins [BR:
slr03032
]
Prokaryotic type
DNA Topoisomerases
L21SP2_3506
DNA repair and recombination proteins [BR:
slr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
L21SP2_3506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
MCD_N
Motif
Other DBs
NCBI-ProteinID:
AHC16842
UniProt:
V5WLJ9
LinkDB
All DBs
Position
complement(3778202..3780685)
Genome browser
AA seq
827 aa
AA seq
DB search
MEAQQGRVIPVAIEDEVKKSYLNYAMSVIVSRALPDVRDGLKPVHRRILFGMNEMGLRSD
RAPKKSARIVGDVLGKYHPHGDMSVYDALVRLAQNFSMRYPLVNGQGNFGSVDGDPPAAM
RYTEARMAKLAEDMLKDIKKETVNFVSNYDDSMEEPEVLPAALPYLLANGASGIAVGMAT
NIPPHNLNEIASAVEAYIQNPEITIDELMEHITGPDFPTGGIIFGTKGVRQAYKTGRGKI
TIRSKVSVETTKSGKDVIIVHELPYQVNKANLVMKIAEYIRDKKIEGISDLRDESDRNGL
RVVIELKKGISPKIILNQLFNQTQLQVNFNVNALALVDGKPQLLNLKDMIVHFVNHRREV
IIRRTKYDLRKAEERAHVLEGLKIALANIDEVIKTIKESENVGVARTRLMDRFMLSEIQA
QAILDMRLQKLTSLETQKILEELEQLNALISELKELLASEEKILGVISDETNDLAGRFSQ
ARRTEKVIDEIEEINIEDLIQKEDMVVIISHKGYIKRVPVTSYRVQGRGGKGMAASKLRD
DDFIENIFIASTHDYILIISSEAKAYYLKVHEIPEGSRTSKGSHIRSLLSISANEDVAAV
VALQDFRDDQFIFMATARGMVKKVSTSDFSNARARGIIAMAMKGDDKIVSAILTSENRDI
ILATRTGVGLRFSEEEVRPMGRTAQGVSGIRLAPGDEIAGAVEANPEFHVLFITEYGNGK
RMTPDDLMPHGRNTKGQIIYTTSDRTGEVVGILNVLEDDEIMVVTSGGTSIKMKASTVAI
QGRTAQGVRVFDIEKPDVVVGLDRVAREEEPEKESKLSKMDPGETPE
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggaagcacaacagggacgggtaattcccgtagcaatagaagatgaagtaaaaaaatcc
tatctgaattatgcaatgtcggtaattgtgtcccgggctctcccggatgtacgggacggg
ctcaagccggtacatcgcagaattcttttcggtatgaacgagatgggactccgctcagac
cgggctcccaaaaagagtgccagaattgtgggagatgtgctgggtaagtatcatccccat
ggagatatgagcgtatacgatgctctggttcgtctggcccagaatttttccatgcggtat
ccgttggtaaacggccagggaaacttcggttcggtggacggggatcccccggctgccatg
aggtacaccgaagcgcgtatggcgaaacttgccgaggatatgctgaaagacatcaagaaa
gaaacggtcaatttcgtttccaactatgatgattccatggaggagccggaagtacttccg
gccgcccttccatacctgctggccaacggtgccagcggaatagccgtgggaatggcaacc
aacatcccgcctcacaatctcaatgagattgcctcggcggtggaagcctacattcagaat
cccgagattaccatagatgaactgatggagcatatcaccggcccggattttcccaccgga
ggtatcattttcggcaccaagggagtccggcaggcgtataaaaccggccggggtaaaatc
accatccgatccaaggtgagtgttgagaccaccaaatccggtaaggatgtgatcatcgtt
cacgaactgccgtatcaggtgaacaaggcaaatcttgtgatgaagattgccgaatacatc
cgggataaaaaaatcgaaggaatatccgatctccgggacgaatctgacagaaacggtctt
cgggtggtaatagagctgaaaaaaggcatcagtccgaaaatcatccttaatcagctgttc
aaccagacccagcttcaggtgaacttcaatgtgaatgccctggcccttgtggacggcaaa
ccccagctcctgaatctcaaggacatgatcgttcactttgtgaatcaccgccgggaagtg
ataatccgccgaaccaagtatgatttgcgaaaagcggaagagcgggctcatgtgctggaa
gggctgaaaattgccctggccaacatcgatgaggttatcaagaccattaaggaaagcgag
aatgtaggggtagccagaacccgtctgatggaccgcttcatgctttccgaaatacaggct
caggcaatcctggatatgcggctgcagaaactcaccagccttgagacccagaaaatcctg
gaggagcttgagcagctgaatgccttaatcagtgagctgaaagaactcctggcaagtgaa
gagaagattctgggtgttatttccgacgaaaccaatgatcttgccggccgattcagccag
gcacgccggactgagaaggttattgatgaaattgaagagatcaacattgaagatctgatt
caaaaagaagatatggtggtgattatcagccacaaaggatatatcaagagggttccggtg
acatcctaccgggttcagggccgtggcgggaaaggcatggctgccagcaagctgcgggat
gatgactttattgaaaacatatttattgcatccacccatgactatattcttattatttca
agcgaagccaaagcatactacctgaaagtacatgagattcccgaaggatccagaacaagc
aaagggtctcatatccgatccctgctcagcatttctgccaatgaagatgtggccgctgtt
gtggcacttcaggatttccgggatgatcagttcatctttatggccacagccagggggatg
gtgaagaaggtctctacttccgatttcagcaatgccagagcccggggaatcattgccatg
gcaatgaagggggatgataaaatcgtttccgcaattctgaccagcgaaaaccgggatatt
atcctggcaacccgtaccggcgtggggctgcgcttcagtgaagaggaggttcgcccgatg
ggacggacggcccagggtgtaagcggaatcaggcttgctcccggagacgaaatcgccgga
gcggtggaggctaatccggaatttcatgttctgttcataaccgaatacggaaacggaaag
cggatgacccccgatgatctgatgccccatggaagaaataccaagggacagattatctat
actacatccgatcgaaccggcgaagtggtagggattctcaacgtactggaggacgatgaa
attatggttgtaaccagcggaggaacttccataaaaatgaaggcttcaacggtggccatc
cagggacgtaccgcccagggcgtgagagtattcgatatagaaaaacccgatgtggtggta
gggcttgaccgtgtcgcccgggaggaagagcctgagaaggaatccaagctgtcaaagatg
gatccaggagaaactcccgaataa
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