Streptomyces lincolnensis: SLINC_0479
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Entry
SLINC_0479 CDS
T04801
Name
(GenBank) putative polyprenyl diphosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
sls
Streptomyces lincolnensis
Pathway
sls00900
Terpenoid backbone biosynthesis
sls00997
Biosynthesis of various other secondary metabolites
sls01100
Metabolic pathways
sls01110
Biosynthesis of secondary metabolites
Module
sls_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
sls00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SLINC_0479
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
SLINC_0479
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sls01006
]
SLINC_0479
Enzymes [BR:
sls01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SLINC_0479
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SLINC_0479
2.5.1.29 geranylgeranyl diphosphate synthase
SLINC_0479
Prenyltransferases [BR:
sls01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SLINC_0479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ANS62703
UniProt:
A0A1B1M2Q9
LinkDB
All DBs
Position
571959..572984
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AA seq
341 aa
AA seq
DB search
MTALTSALAAPEVLDRCRALVRPALEEAVGRLHPWVAEMAGYAFGWCEVGGAPAKASGGK
GVRQALAVLGAEAAGAPGRAGVPAAVAVELVHTFSLLHDDIMDGDPARRRRPTVWKAYGT
GPAVLAGDGLFALAVETLAVTSAGPEALRLLSVALGDLVRGQADDLLFAGRPWTGPGRVR
PGEYRALAEHKTGSLLGGAAALGARLGGAPPTVVSALDRAGRHLGIAFQVVDDVLGIWGD
PAVTGKPVHGDLRERKKTFPVLAALDAPCPAAGRLAVVLESGGDLAQAAALIEEAGGREA
ALAEARRHIAAVEAVLADAPLAAGASDELRALLEFLVRRDL
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcgctgacgtcggccctggccgcccccgaagtcctggaccgctgccgcgcgttg
gtgcggcccgcgctggaggaggcggtcgggcggctgcatccgtgggtggccgagatggcc
gggtacgcgttcggctggtgcgaggtgggcggcgcgcccgcgaaggcgtccggcgggaag
ggcgtacggcaggcactggccgtgctcggcgccgaggccgccggtgcgcccgggcgggcc
ggagtgcccgcggcggtcgcggtcgagctggtgcacaccttctccctgctgcacgacgac
atcatggacggcgatccggcccggcgccgccgccccaccgtgtggaaggcgtacggcacg
ggtccggcggtcctggcgggcgacggcctgttcgcgctggccgtggagaccctcgccgtc
acgtcggcgggccccgaggccctgcgcctgctgtccgtggcgctcggcgatctggtgcgc
ggccaggcggacgacctgctgttcgccggccggccctggaccgggccggggcgggtgcgg
cccggcgagtaccgcgcgctggccgagcacaagaccgggtccctgctgggcggtgcggcc
gcgctcggcgcccggctcggcggcgcaccgccgaccgtggtcagcgccctggaccgcgcc
ggacgccatctggggatcgccttccaggtcgtcgacgacgtgctgggcatctggggcgat
cccgccgtgaccggcaagcccgtgcacggcgatctgcgggagcggaagaagaccttcccg
gtcctggccgccctcgacgcgccctgccccgcggccgggcggctcgccgtggtcctggaa
tccggcggggacctcgcacaggcggccgccctgatcgaggaggccgggggccgtgaggca
gcgctcgccgaggctcgccggcacatcgcggccgtggaggcggtgctcgccgacgcaccg
ctggcggcgggggcgtccgacgagctgcgtgcgctgctggagttcctcgtccggcgcgat
ctctga
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