Streptomyces lincolnensis: SLINC_0508
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Entry
SLINC_0508 CDS
T04801
Name
(GenBank) putative RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sls
Streptomyces lincolnensis
Brite
KEGG Orthology (KO) [BR:
sls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sls03021
]
SLINC_0508
Transcription machinery [BR:
sls03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SLINC_0508
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
HTH_38
HTH_Crp_2
MarR
HTH_27
Sigma70_ECF
MarR_2
GerE
IF2_N
HTH_31
Motif
Other DBs
NCBI-ProteinID:
ANS62732
UniProt:
A0A1B1M2T2
LinkDB
All DBs
Position
600217..601107
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AA seq
296 aa
AA seq
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MDTAVIRSEAQVVEKTAGTRTTGDGPLPGVEDPKTVAPRDARELSRQFFHRLAALEEGTH
EYQYARNTLIEMNMSLVRFAAGRFRGRGDDMEDIVQTGMIGLIKAIDRFELAREVEFTSF
ALPYIVGEIKRFFRDTTWAVHVPRRLQELRVELAKAREELASRLDREPTVAELATLMNIS
ENEVIEGQIASNGYNSSSLDAALTGDGPEGGESVLADFIGVEEDGLRLVEDFQSLAPLMA
ELSDRDRQIIHMRFVEEATQAEIGERLGCSQMHVSRLIKRIITRLREGMLGELGCA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgccgtgatccggtcggaggcacaggtcgtcgaaaagaccgccgggaccagg
acgacgggtgacgggccgctgccgggagtcgaggatccgaagaccgtggccccgagggac
gcccgtgagctgtcccgtcagttcttccaccgtttggccgcactcgaagaaggcacgcac
gagtaccagtacgcccgcaacacgctcatcgagatgaacatgtccctcgtgcggttcgcg
gccggccggttccgcggccgcggcgacgacatggaggacatcgtccagaccgggatgatc
ggcctgatcaaggccatcgaccgtttcgagctggcccgtgaggtggagttcacctcgttc
gcgctgccctacatcgtcggcgagatcaagcggttcttccgtgacaccacgtgggccgtg
catgtgccgcgccggctccaggaactgcgcgtggagctggccaaggcccgtgaggagctc
gccagccggctggaccgggagccgacggtcgccgaactcgccacgctgatgaacatctcc
gagaacgaggtgatcgaggggcagatcgcctccaacggctacaactcctcgtccctggac
gccgcgctcaccggtgacggccccgagggcggcgagtcggttctcgccgacttcatcggt
gtcgaggaggacgggctgcggctcgtggaggacttccagtccctcgccccgctcatggcg
gagctgagcgaccgagaccggcagatcatccatatgcggttcgtggaggaggccacacag
gcggagatcggtgagcggctcggctgctcgcagatgcatgtgtcccggctgatcaagcgg
atcatcacacggttgcgcgagggcatgctgggcgagctgggctgcgcctga
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