Streptomyces lincolnensis: SLINC_1196
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Entry
SLINC_1196 CDS
T04801
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sls
Streptomyces lincolnensis
Pathway
sls03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SLINC_1196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sls03400
]
SLINC_1196
Enzymes [BR:
sls01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SLINC_1196
DNA repair and recombination proteins [BR:
sls03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SLINC_1196
Prokaryotic type
SLINC_1196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ANS63420
UniProt:
A0A1B1M441
LinkDB
All DBs
Position
1425272..1425949
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AA seq
225 aa
AA seq
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MAPRPLHEIVEPGWAKALEPVAGRIAEMGDFLRAEIAAGRTYLPAGPNVLRAFQQPFDEV
RVLIVGQDPYPTPGHAVGLSFSVAPEVRPLPGSLINIFRELGTDLGLPQPSNGDLTPWTQ
QGVLLLNRALTTAPRSPGAHRGKGWEEVTEQAIRALAARGKPLVSVLWGRDARNLRPLLG
HLPSVESAHPSPMSADRGFFGSRPFSRANDLLIGQGGQPVDWRLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtggcaccacgaccgttgcatgaaatcgtcgaaccgggctgggcgaaggccctggaaccc
gtcgccgggcggatcgccgagatgggcgacttcctgcgcgcggagatcgccgcgggacgc
acctatctccccgccgggccgaatgtcctgcgggccttccagcagcccttcgacgaggta
cgggtcctcatcgtgggacaggatccgtacccgacgccggggcacgcggtggggctgtcg
ttctcggtcgcgcccgaggtgcgtccgctgcccggcagcctgatcaacatcttccgcgag
ctgggcaccgacctgggtctgccgcagccgtcgaacggtgatctgacgccgtggacccag
cagggcgtgctgctgctcaacagggcgctgaccaccgcgccgcgcagcccgggggcacac
cgcggcaagggctgggaggaggtcaccgagcaggccatacgcgccctggcggcgcgcggg
aagccgctcgtgtcggtcctgtggggccgggacgcccgcaatctccgcccgctgctgggt
catctgccgtcggtggagtcggcgcacccctcgccgatgtcggcggaccgcgggttcttc
ggctcacgccccttcagccgggcgaacgacctgctgatcggacagggcggacagccggtg
gactggcgcctgccatga
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