Streptomyces lincolnensis: SLINC_1657
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Entry
SLINC_1657 CDS
T04801
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sls
Streptomyces lincolnensis
Pathway
sls03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SLINC_1657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sls03400
]
SLINC_1657
Enzymes [BR:
sls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SLINC_1657
DNA repair and recombination proteins [BR:
sls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SLINC_1657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
C1_1
Cas12f1-like_TNB
PIN_10
Motif
Other DBs
NCBI-ProteinID:
ANS63881
UniProt:
A0A1B1M5E8
LinkDB
All DBs
Position
complement(1998914..2000974)
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AA seq
686 aa
AA seq
DB search
MPRAKPRTWRGAALAKELPVARVLVDKGVLHLDRYFDYAVPEELDEQAQPGVRVRVRFGA
GRHRVRDGRREGGGLIDGFLVERLAESDYSGPLAALAQVVSPEPVLGAELLGLARAVADR
YAGSLADVLQLAVPPRSARAEQRPSPDPLPPPGVPDVGSWGRYERGGAFVESLASGGAPR
AVWNALPGPEWSEELARAVVATLASGRGALVVLPDGRAVARVDAALTALLGEGRHAVLTA
DAGPEKRYREWLAVRRGAVRAVIGTRAAMFAPVQDLGLVAVWDDGDDSHSEQHAPQPHAR
EVLLLRAAQDKCGFLLGSWSCTVEAAQLVESGWARPLVATRDQVRAAAPLVRTVGDGDLA
RDEAARAARLPTLAWQAVREGLRHGPVLVQVPRRGYVPRMACANCRAPARCRHCAGPLEG
QESGAALRCGWCGQGEGAWHCPECGGFRLRAQVVGARRTAEELGRAFPAVAVRTSGREHV
LDTVPSAPALVVSTPGAEPVAEGGYAAALLLDGWAMLGRPDLRAGEDALRRWIAAASLVR
PQGAGGTVVIVAEPTLRPVQALVRWDPVGHAVRELAERGELGFPPVSRMAAVSATAEAVA
EFMGAVELPSDAEVLGPVPLPVTGPGRPRRVGGPPPGEHWERALIRVPPGSGAALAAALK
AAQAARMARGGGEAAVRVRIDPPDIG
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcgggccaagccgcggacctggcggggggccgcgctggccaaggagctgcctgtc
gcccgggtgctggtcgacaagggcgtgctgcatcttgaccggtacttcgactacgcggtg
ccggaggagctcgatgagcaggcgcagcccggggtgcgggtccgggtgcggttcggggcc
gggcggcatcgggtgcgggacgggcggcgtgagggcggggggctgatcgacggctttctc
gtggagcggctggccgagtcggactactccgggccgttggcggcgctggctcaggtcgtc
tcgcccgagccggtgctcggcgcggagctgttggggctggcccgtgccgtggcggaccgg
tacgcggggagtctggccgatgtgttgcagctggcggttccgccgcgcagcgcgcgggcc
gagcagcggccctcgcccgacccgctgccccctcccggggtgcccgacgtggggtcctgg
gggcggtacgagcgcgggggcgcgtttgtcgagtccctggcctcggggggcgcgccgcgg
gccgtgtggaacgccctgccgggccccgagtggagcgaggagctggcgcgggccgtcgtg
gcgacgctggcctccggacgcggggcgctcgtcgtcctgccggacgggcgggcggtggcg
cgggtcgacgccgcgctgaccgcgctgctgggggaggggcgtcacgcggtgctcaccgcc
gacgccggacccgagaagcggtaccgggagtggctcgccgtgcgccggggggccgtccgg
gccgtcatcgggacccgggccgccatgttcgcgccggtacaggatcttggtctggtcgcc
gtctgggacgacggtgacgacagccacagcgagcagcacgcaccccagccccatgcccgc
gaggtgctcctgctgcgggccgcccaggacaagtgcggcttcctgctgggcagttggagc
tgcaccgtggaggccgcgcaactcgtggagagcggctgggcccgacccctggtcgccacc
cgggaccaggtgcgggccgccgcacccctggtcaggacggtgggggacggtgacctcgcg
cgcgacgaggcggcgcgggccgcccgcctgccgacgctcgcctggcaggccgtcagggag
gggctgcggcacgggccggtgctcgtgcaggtgccccggcggggctacgtgccgagaatg
gcgtgcgccaactgccgtgccccggcccggtgtcggcactgtgccggacccctggagggc
caggaatccggggccgcgctgcgatgcgggtggtgtgggcagggggaaggcgcctggcac
tgcccggagtgcggcggcttccggctgcgggcgcaggtcgtgggcgcgcggcggaccgcc
gaggagctgggcagggcgtttccggcggtcgcggtgcggacgtcggggcgcgagcacgtg
ctggacaccgtgccgtcggcgcccgcgctggtggtgagcacgccgggtgccgaacccgtc
gccgagggcggctacgcggccgccctgctgctggacggctgggccatgctcggacggccc
gacctgcgcgccggtgaggacgcgctgcggcggtggatcgcggccgcctcactcgtacgg
ccgcagggcgcggggggcacggtcgtgatcgtcgccgagcccacgctgcggcccgtgcag
gcgctggtgcgctgggatccggtgggccacgcggtgcgcgagctcgccgagcggggcgag
ctggggttcccgccggtgtcgagaatggcggccgtgtcggcgaccgccgaggccgtcgcg
gaattcatgggcgcagtggaactgccctcggacgccgaggtgttgggaccggtgccgctg
cccgtcacgggcccgggacgcccgcggcgggtgggcggaccgcccccgggggagcactgg
gagcgcgcgctgatccgggtgcccccgggcagcggggcggcgctggccgccgcgctgaag
gccgcacaggcggctcggatggcgcgcgggggcggggaggccgcggtgcgggtgcggatc
gatccgcccgacatcgggtga
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