Streptomyces lincolnensis: SLINC_2393
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Entry
SLINC_2393 CDS
T04801
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sls
Streptomyces lincolnensis
Pathway
sls03030
DNA replication
sls03430
Mismatch repair
sls03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SLINC_2393
03430 Mismatch repair
SLINC_2393
03440 Homologous recombination
SLINC_2393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sls03032
]
SLINC_2393
03400 DNA repair and recombination proteins [BR:
sls03400
]
SLINC_2393
Enzymes [BR:
sls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SLINC_2393
DNA replication proteins [BR:
sls03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SLINC_2393
DNA repair and recombination proteins [BR:
sls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SLINC_2393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
ANS64617
UniProt:
A0A1B1M844
LinkDB
All DBs
Position
complement(2842993..2846532)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHTAQKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTIWAANKTGLHNLFKL
SSDAYAEGWLQKWPRMDKETISQWSEGLIASTGCPSGELQTRLRLGQFDEALKSAAEYQD
IFGKDRYFLELMDHGIEIEHRVRDGLLEIGRKLGIPPLVTNDSHYTYAHESVAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTDEMYAIDSSDAWQEGCANTLLVAEQIDTTGMFEAKN
LMPKFDIPEGFTEVTWFKEEVRRGMERRFPGGVPEDRQKQAEYEMDVIIQMGFPGYFLVV
ADFIMWAKNQGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLNGITDPSHPRYSEAGEIRAMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPIWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAVKMVKS
NKGVDLDLLGLPLDDPATFELLQRGETLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMDSHTNYALRKNKLQEITPIHKELEEPLREVLDVTHGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPDELAKNFVLFQEGAQKKGYSEEAIKALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANHPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
VHNFAAQGDDVILFGLEAVRNVGTNVVESIIKSRKAKGKYASFPDYLDKVEAVACNKRTT
ESLIKAGAFDTLGHTRKGLTAHFEPMIDNVVAVKRKEAEGQFDLFGGMGEEESSEPGFGL
DVEFTTEEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIAQLTGGEHADGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMELQVPDLSNAGTNAPVILTIPATRVTPPMVSRLGEILSHHKGESEVRI
KLQGPRKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagccgccgttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctgaaggacatgttcaacgcgtgcaacgagatgggcatgacccatatcgcg
atgtccgaccacggcaacctgcacggggcgtacgacttcttccacaccgcgcagaaggcg
ggggtcaccccgatcatcgggatcgaggcgtatgtggcgccggagtcgcggcgcaacaag
cgcaagatccagtgggggcagccgcaccagaagcgggacgacgtctcgggttcgggtggt
tacacccacaagacgatctgggcggcgaacaagacgggtctgcacaacctcttcaagctg
tcctcggacgcgtatgccgagggctggttgcagaagtggccgaggatggacaaggagacc
atctcgcagtggtccgaggggctcatcgcctccaccggctgtccgtcgggggagctccag
acccgcctgcggctgggccagttcgacgaggccctgaagtccgccgccgagtaccaggac
atcttcggcaaggaccggtacttcctggagctgatggaccacggaatcgagatcgagcac
cgggtccgcgacggcctgctggagatcggcaggaagctcggcatcccgccgctggtcacc
aacgactcgcactacacgtacgcgcacgagtcggtcgcgcacgacgcgctgctgtgcatc
cagaccggcaagaacctctccgatccggaccgcttccgcttcgacggcaccggctactac
ctgaagtccacggacgagatgtacgccatcgactcctcggacgcctggcaggagggctgc
gcgaacaccctcctggtcgccgagcagatcgacaccaccggcatgttcgaggcgaagaac
ctcatgccgaagttcgacatccccgagggcttcaccgaggtcacctggttcaaggaggag
gtccgccggggcatggagcgccgcttccccggcggcgtcccggaggaccggcagaagcag
gccgagtacgagatggacgtcatcatccagatggggttcccgggctacttcctcgtcgtc
gccgacttcatcatgtgggccaagaaccagggcatcgcggtcggccccggccgaggatcc
gcggccggttcgatcgtcgcgtacgccatgggcatcaccgacctcgacccgatcccgcac
ggactgatcttcgagcggttcctgaaccccgagcgcgtctcgatgcccgatgtcgacatc
gacttcgacgagcgtcggcgcgtcgaggtgatccggtacgtgacggagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaagatcaaggccaagaacgcgatcaaggac
tccgcgcgcgtgctgggctacccgtacgcgatgggcgaccgcctcaccaaggccatgccc
gccgatgtcctcggcaagggcatcgacctcaacggcatcaccgacccctcgcacccgcgc
tacagcgaggccggcgagatccgcgcgatgtacgagaacgaaccggacgtgaagaaggtc
atcgacaccgccaagggcgtcgagggcctggtccggcagatgggtgtgcacgccgccggc
gtgatcatgtccagcgagcccatcgtcgaccacgccccgatctgggtgcggcacacggac
ggcgtgacgatcacgcagtgggactacccgcagtgcgagtcgctcggcctgctgaagatg
gacttcctcggcctgcgcaacctgacgatcatggacgacgccgtcaagatggtgaagtcc
aacaagggcgtcgatctcgacctgctgggcctgccgctggacgatccggcgaccttcgaa
ctgctccagcgcggcgagacgctcggtgtcttccagttcgacggcggccccatgcgctcc
ctgctgcggctgatgaagcccgacaacttcgaagacatctccgccgtctccgcgctctac
cgtcccggcccgatgggcatggactcgcacaccaactacgcgctgcgcaagaacaagctc
caggagatcacccccatccacaaggagctcgaagagcccctcagggaggtcctggacgtc
acccacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgccggg
tactcgctcggcgaggccgacatcctgcgccgcgtcatgggcaagaagaagcccgacgag
ctggcgaagaacttcgtcctcttccaggagggcgcccagaagaaggggtacagcgaagag
gccatcaaggccctgtgggacgtgctggtccccttcgccggctacgccttcaacaaggcg
cactccgccgcgtacggcctggtctcctactggaccgcctatctcaaggccaaccatccg
gccgagtacatggcggcgttgctgacgtccgtgaaggacgacaaggacaagtcggcggtc
tatctgaacgagtgccggcggatgggcatcaaggtgctgccgccgaatgtgaacgagtcg
gtgcacaacttcgccgcgcagggcgacgacgtgatcctgttcggcctggaggcggtgcgc
aacgtgggcaccaacgtggtcgagtcgatcatcaagagccgcaaggccaagggcaagtac
gcctccttccccgactatctggacaaggtcgaggcggtcgcctgcaacaagcggaccacg
gaatcgctgatcaaggcgggcgcgttcgacaccctggggcacacccgcaaggggctgacc
gcgcacttcgagccgatgatcgacaacgtggtggcggtcaagcgcaaggaggccgagggc
cagttcgacctgttcggcgggatgggcgaggaggagtccagcgagcccggcttcggcctg
gacgtggagttcaccaccgaggagtgggacaagacctacctgctcgcccaggagcgggag
atgctcggtctgtacgtctccgaccacccgctgttcggcctggagcacgtcctgtcggac
aaggcggacgccggtatcgcgcagctgaccgggggtgagcacgcggacggggcggtggtg
accatcggcgggatcatctccgggctccagcgcaagatgaccaagcagggcaacgcctgg
gcgatcgccaccgtggaggacctggcgggctcgatcgagtgcatgttcttcccggcgacc
tatcagctggtctccacccaactcgtcgaggacgcggtggtcttcgtcaagggccgcctc
gacaagcgcgaggacgtcccccggctggtcgcgatggaactccaggtccccgacctgtcg
aacgcgggcaccaacgcgcccgtgatcctcaccatcccggccacccgggtcaccccgccg
atggtcagccgcctcggcgagatcctcagccaccacaagggcgagagcgaggtccggatc
aagctccagggcccgcgcaagaccaccgtgctgcgcctggaccggcaccgggtcaagccg
gacccggccctcttcggcgacctgaaggtgctgctgggaccgtcctgcctggccggctga
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