Streptomyces lincolnensis: SLINC_2849
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Entry
SLINC_2849 CDS
T04801
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
sls
Streptomyces lincolnensis
Pathway
sls02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sls00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SLINC_2849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sls03021
]
SLINC_2849
Transcription machinery [BR:
sls03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SLINC_2849
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_28
KORA
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
ANS65073
UniProt:
A0A1B1M9B2
LinkDB
All DBs
Position
complement(3376197..3377540)
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AA seq
447 aa
AA seq
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MAVMCRTPHWVPVPESSERGRSVPSGSHTPAVPLIAYGTDSGEAADSAPEAALPHTSAAI
ILEVAPVQTQTLTQTDSRTAAGADSTEPDAETDVLVAVPPQNRVAHHPEAEPEASPEPAE
PPAEVMETEAPEPVEPVRARPDTSGPSSDLFRQYLREIGRIPLLTAAEEVELARRVEAGL
FAEEKLSNTPDLDSQLALDLDRLVVMGRMAKRRLIEANLRLVVSVAKRYVGRGLTMLDLV
QEGNLGLIRAVEKFDYARGYKFSTYATWWIRQAMSRALADQARTIRVPVHVVELINRVVR
VQRRMLQERGYEPTPDEVAAHLDLTPERVSEVLRLAQEPVSLHAPVGEEDDVALGDLIED
GDATSPVESAAFLLLREHLEAVLSTLGERERKVVQLRYGLADGRPRTLEEIGRIFGVTRE
RIRQIESKTLNKLRDHAFADQLRGYLD
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtggcggtgatgtgtcgtactccacactgggttccggtgcctgagtcctcggagcgcggc
cgatccgtccccagcggatcccacacccccgcggttccgctcatcgcgtacgggacggac
agcggcgaggccgccgactccgcccccgaagcagcgctgccgcacacctcagcagcgatc
atcctggaggtcgcccccgtgcagacccagaccctgacacagaccgacagcaggaccgcc
gccggcgcggacagcacagagccggacgccgagaccgacgtgctggtcgcggtacccccg
cagaaccgtgtcgcgcaccatccggaagcggagccggaggcttcgcccgaaccggccgag
ccgcccgccgaggtgatggagaccgaggcgcccgaacctgtggaacccgtgcgcgcccgc
cccgacaccagcggcccgtcctcggacctgttccgccagtacctgcgggagatcggccgc
atcccgctgctcaccgcggccgaggaggtcgaactcgcccgccgggtcgaggccgggctc
ttcgccgaggagaagctgagcaacacgcccgacctggacagccagttggccctcgacctc
gaccggctggtcgtgatgggccgcatggccaagcgccgtctcatcgaggccaacctgcgg
ctcgtggtctccgtcgccaaacggtacgtcggccgcggactgaccatgctcgaccttgtc
caggaaggcaacctcggcctgatcagggccgtggagaagttcgactacgcccgcggctac
aagttctcgacctacgccacctggtggatccgccaggccatgtcccgggccctcgccgac
caggcccggaccatccgggtcccggtccacgtcgtcgagttgatcaaccgagtggtgcgg
gtgcagcgccggatgctccaggaacgcgggtacgaacccacgcccgacgaggtcgccgcc
cacctcgacctcacgccggaacgcgtgagtgaggtcctgcggctggcccaggagccggtg
tccctgcacgccccggtgggcgaggaggacgacgtggcactcggcgacctcatcgaggac
ggcgacgcgacgtctccggtggagtcggcggcgttcctgctgctcagggagcacctggag
gcggtgctgtcgaccctgggggagcgggagcggaaggtcgtccaactgcgctacgggctg
gccgacggccgcccgcgcacgctggaggagatcggccggatcttcggggtgacgcgggag
cggataaggcagatcgagtccaagacgctgaacaagctgcgggaccatgcctttgcggat
cagctgaggggctatctggactga
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