KEGG   Streptomyces lincolnensis: SLINC_2849
Entry
SLINC_2849        CDS       T04801                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
sls  Streptomyces lincolnensis
Pathway
sls02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:sls00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    SLINC_2849
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sls03021]
    SLINC_2849
Transcription machinery [BR:sls03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SLINC_2849
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_28 KORA LexA_DNA_bind
Other DBs
NCBI-ProteinID: ANS65073
UniProt: A0A1B1M9B2
LinkDB
Position
complement(3376197..3377540)
AA seq 447 aa
MAVMCRTPHWVPVPESSERGRSVPSGSHTPAVPLIAYGTDSGEAADSAPEAALPHTSAAI
ILEVAPVQTQTLTQTDSRTAAGADSTEPDAETDVLVAVPPQNRVAHHPEAEPEASPEPAE
PPAEVMETEAPEPVEPVRARPDTSGPSSDLFRQYLREIGRIPLLTAAEEVELARRVEAGL
FAEEKLSNTPDLDSQLALDLDRLVVMGRMAKRRLIEANLRLVVSVAKRYVGRGLTMLDLV
QEGNLGLIRAVEKFDYARGYKFSTYATWWIRQAMSRALADQARTIRVPVHVVELINRVVR
VQRRMLQERGYEPTPDEVAAHLDLTPERVSEVLRLAQEPVSLHAPVGEEDDVALGDLIED
GDATSPVESAAFLLLREHLEAVLSTLGERERKVVQLRYGLADGRPRTLEEIGRIFGVTRE
RIRQIESKTLNKLRDHAFADQLRGYLD
NT seq 1344 nt   +upstreamnt  +downstreamnt
gtggcggtgatgtgtcgtactccacactgggttccggtgcctgagtcctcggagcgcggc
cgatccgtccccagcggatcccacacccccgcggttccgctcatcgcgtacgggacggac
agcggcgaggccgccgactccgcccccgaagcagcgctgccgcacacctcagcagcgatc
atcctggaggtcgcccccgtgcagacccagaccctgacacagaccgacagcaggaccgcc
gccggcgcggacagcacagagccggacgccgagaccgacgtgctggtcgcggtacccccg
cagaaccgtgtcgcgcaccatccggaagcggagccggaggcttcgcccgaaccggccgag
ccgcccgccgaggtgatggagaccgaggcgcccgaacctgtggaacccgtgcgcgcccgc
cccgacaccagcggcccgtcctcggacctgttccgccagtacctgcgggagatcggccgc
atcccgctgctcaccgcggccgaggaggtcgaactcgcccgccgggtcgaggccgggctc
ttcgccgaggagaagctgagcaacacgcccgacctggacagccagttggccctcgacctc
gaccggctggtcgtgatgggccgcatggccaagcgccgtctcatcgaggccaacctgcgg
ctcgtggtctccgtcgccaaacggtacgtcggccgcggactgaccatgctcgaccttgtc
caggaaggcaacctcggcctgatcagggccgtggagaagttcgactacgcccgcggctac
aagttctcgacctacgccacctggtggatccgccaggccatgtcccgggccctcgccgac
caggcccggaccatccgggtcccggtccacgtcgtcgagttgatcaaccgagtggtgcgg
gtgcagcgccggatgctccaggaacgcgggtacgaacccacgcccgacgaggtcgccgcc
cacctcgacctcacgccggaacgcgtgagtgaggtcctgcggctggcccaggagccggtg
tccctgcacgccccggtgggcgaggaggacgacgtggcactcggcgacctcatcgaggac
ggcgacgcgacgtctccggtggagtcggcggcgttcctgctgctcagggagcacctggag
gcggtgctgtcgaccctgggggagcgggagcggaaggtcgtccaactgcgctacgggctg
gccgacggccgcccgcgcacgctggaggagatcggccggatcttcggggtgacgcgggag
cggataaggcagatcgagtccaagacgctgaacaagctgcgggaccatgcctttgcggat
cagctgaggggctatctggactga

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