Streptomyces lincolnensis: SLINC_3481
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Entry
SLINC_3481 CDS
T04801
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sls
Streptomyces lincolnensis
Brite
KEGG Orthology (KO) [BR:
sls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sls03021
]
SLINC_3481
Transcription machinery [BR:
sls03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SLINC_3481
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
MarR_2
HTH_Crp_2
HTH_24
Sigma70_ECF
HTH_3
DUF7343
GerE
MarR
DnaB_bind
KORA
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
ANS65705
UniProt:
A0A1B1MAP5
LinkDB
All DBs
Position
4146410..4147339
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AA seq
309 aa
AA seq
DB search
MEDIMSPRLDASHTHEATSTSPPEHLDPIEQNSDVRHEVDDVLAGLPEIPPYDEVGPVDA
RALSKTLFARLESLEEGTHEYSYVRNTLVELNLALVKFAASRFRSRSEPMEDIIQVGTIG
LIKAIDRFELSRGVEFPTFAMPTIVGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGDELA
QKLDRAPTVGELAERLGLSKDEVVEGMAASNAYTASSLDAQPEEDDAEGALADRIGYEDH
GLEGIEYVESLKPLIAELPSRDRKILSLRFVAGMTQSEIGDELGISQMHVSRLLSRTLVR
LRKGLTVEE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatcatgtcaccccggctcgacgcatcgcatacccatgaggcgacgtcgaca
tcccccccggaacatctggatcccatcgagcagaacagcgacgtacgtcatgaagtcgac
gatgtgctcgccgggcttccggagatcccaccgtacgacgaggtggggccggtggacgca
cgggccctgtccaagaccctcttcgcgcggctggagtcgcttgaggaaggcacccacgaa
tactcgtacgtccgcaacacgctcgtcgaactcaacctcgccctggtcaagttcgccgcc
tcccgcttccgctcccgcagtgagccgatggaggacatcatccaggtcggcacgatcggt
ctgatcaaggcgatcgaccgcttcgagctcagccggggtgtggagttccccaccttcgcg
atgccaaccatcgtcggtgagatcaagcgtttcttccgcgacacctcgtggtcggtgcgg
gtcccgcgccggctccaggagctgcggctcgacctggccaaggccggcgacgaactggcc
cagaagctggaccgggcgccgaccgtcggcgagctcgccgagcgtctcggcctgtccaag
gacgaggtcgtcgagggcatggccgcgtcgaacgcgtacaccgcctcctcgctggacgcc
cagccggaggaggacgacgccgagggcgcgctggccgaccgtatcggctacgaggaccac
gggctcgaaggcatcgagtacgtcgagtccctgaagccgctgatcgccgaacttccctcc
cgggaccggaagatcctctccctgcgcttcgtcgcgggcatgacccagtccgagatcggc
gacgaactcggcatctcgcagatgcacgtgtcccggctgctgtcgcggacgctggtgcgg
ctgcggaaggggctgacggtcgaggagtga
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