Streptomyces lincolnensis: SLINC_3967
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Entry
SLINC_3967 CDS
T04801
Name
(GenBank) hypothetical protein
KO
K01051
pectinesterase [EC:
3.1.1.11
]
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sls
Streptomyces lincolnensis
Pathway
sls00040
Pentose and glucuronate interconversions
sls01100
Metabolic pathways
sls02020
Two-component system
sls02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sls00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SLINC_3967
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SLINC_3967
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SLINC_3967
Enzymes [BR:
sls01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
SLINC_3967
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SLINC_3967
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ANS66191
UniProt:
A0A1B1MC74
LinkDB
All DBs
Position
4725588..4727645
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AA seq
685 aa
AA seq
DB search
MSEIRSKARHRRSRTALAAGVPLALTAAGVMSYGTVFGVGAQAEAAAAAAPAWAADTADG
FASVNSLGQNGTYGGRDGKTVTVKTLADLEKYATAAEPYVIVVAATITMNPVGKEIKVRS
DKTIVGAGTSGHIVGGGFFLGSGVHNVIIRNLTVRDAYQGVWNDKEHDFDAIQMDGAHHV
WIDHNDLRNMADGLIDVRKDTTNVTVSWNKLGNDNKAFGIGWTDNVVTDITVHHNWIRET
EQRNPSTDNAAHAHLYNNFLEDVAGTTIKSSYGNYARGKTKMLLENSYFQGMNNPVIKDS
TASLVQKGNTFVSTTGRNESGGTAFDPKSYYGYTADRTADVPGLLKSGAGPRGSIGTAST
ASTKAAAATTLTVAKDGTGQYTTVQAAVNAVPANNPSRVVIAVKPGTYRELVKVPSNKPH
VTIQGTGGSRKDTTIVYNNASGTPKPGGGTYGTGGSATVAVEADDFQARNLTVSNDFDEA
ANQSLSGHQAVALRTASDKVFLDSIIVEGDQDTLLLDTAAKDRLGRVYMKNSYIVGNVDF
IFGRATAVIDGSVITLKKRWNGTSAGYITAPSTAANRRGILIANSTVNGGVSDRTFYLGR
PWHAGGDASLDPQTTIRNTTLSAAIRTTPWTDMSGFSWKDDRFAEYKNTGAGAGAAGSER
PHLTDAQAAGQEVSDWLAGWTPAAS
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagatccgcagcaaggcacgccaccgcagaagcaggacggccctggcggccggt
gtccccctggcgctgacggccgccggggtcatgtcgtacggcacggtgttcggcgtcggg
gcgcaggcggaggccgccgcggccgccgctcccgcgtgggcggccgataccgccgacggc
ttcgcctccgtcaactcgctcgggcagaacggtacttatggcggccgggacggcaagacg
gtcaccgtgaagacgctcgccgacctggagaagtacgcgacggccgccgagccgtacgtc
atcgtcgtcgccgcgaccatcaccatgaaccccgtcgggaaggagatcaaggtccggtcg
gacaagaccatcgtcggtgccgggacctccgggcacatcgtcggcggcggcttcttcctc
gggtcgggcgtccacaacgtcatcatccggaacctgaccgtccgggacgcctaccagggc
gtgtggaacgacaaggagcacgacttcgacgcgatccagatggacggggcccaccacgtc
tggatcgaccacaacgacctgcggaacatggccgacggtctcatcgacgtccgcaaggac
accaccaacgtcaccgtctcctggaacaagctcggcaacgacaacaaggccttcggcatc
ggctggacggacaacgtcgtcaccgacatcaccgtccaccacaactggatccgcgagacc
gagcagcgcaacccctccacggacaacgccgcccacgcgcacctgtacaacaacttcctg
gaggacgtggccggcacgaccatcaagtcgtcctacggcaactacgcgcgcgggaagacg
aagatgctcctggagaactcctacttccagggcatgaacaaccccgtcatcaaggacagc
accgcgagcctggtccagaagggcaacaccttcgtctccacgaccggccgcaacgagagc
ggcggcacggccttcgacccgaagtcgtactacggctacaccgccgacaggacggccgac
gtgcccggcctcctcaagtccggtgccgggccccgcggttccatcggtacggcatccacc
gccagcaccaaggccgccgccgcgaccaccctcaccgtcgccaaggacggcaccggccag
tacacgaccgtgcaggccgccgtgaacgccgtaccggcgaacaacccctcccgcgtcgtg
atcgccgtgaagccggggacgtaccgcgagctcgtcaaggtcccctccaacaagccgcac
gtcaccatccagggcacgggcggcagccgtaaggacacgacgatcgtctacaacaacgcg
tcggggaccccgaagcccggcggcggcacgtacggcaccggcggcagcgccaccgtcgcc
gtcgaggccgacgacttccaggcccgcaacctgaccgtctccaacgacttcgacgaggcc
gccaaccagtccctgtccgggcaccaggccgtcgccctgcgcaccgcctccgacaaggtg
ttcctggactcgatcatcgtcgagggcgaccaggacaccctgttgctggacacggccgcc
aaggacaggctcggccgggtctacatgaagaactcctacatcgtgggcaacgtcgacttc
atcttcggccgggcgaccgcggtgatcgacgggtcggtcatcaccctcaagaagcgctgg
aacggcacctcggccggctacatcaccgccccctccacggccgccaaccgcaggggcatc
ctgatcgccaactccacggtgaacggcggtgtctccgaccgcaccttctacctcggccgc
ccctggcacgccggcggtgacgcgagcctcgacccgcagaccacgattcgcaacaccacc
ctcagcgccgcgatccggaccaccccctggaccgacatgagcggcttctcctggaaggac
gaccgcttcgccgagtacaagaacaccggcgcgggcgcgggtgccgcgggctccgagcgc
ccgcacctgaccgacgcgcaggccgccgggcaggaggtctccgactggctggccggctgg
acaccggccgcctcctga
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