Streptomyces lincolnensis: SLINC_4278
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Entry
SLINC_4278 CDS
T04801
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sls
Streptomyces lincolnensis
Brite
KEGG Orthology (KO) [BR:
sls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sls03032
]
SLINC_4278
03400 DNA repair and recombination proteins [BR:
sls03400
]
SLINC_4278
Enzymes [BR:
sls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SLINC_4278
DNA replication proteins [BR:
sls03032
]
Prokaryotic type
DNA Topoisomerases
SLINC_4278
DNA repair and recombination proteins [BR:
sls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SLINC_4278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ANS66502
UniProt:
A0A1B1MDN2
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All DBs
Position
5103134..5105206
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AA seq
690 aa
AA seq
DB search
MLCQKGRFVADSGNPNENIPSTDAAAISSNGEVTASYDASAITVLEGLDAVRKRPGMYIG
STGERGLHHLVQEVVDNSVDEALAGHADTIDVTILADGGVRVIDNGRGIPVGIVPSEGKP
AVEVVLTVLHAGGKFGGGGYAVSGGLHGVGVSVVNALSTKVSVEIKTDGHRWTQDYKLGV
PTAPLAQHEATDEHGTTVTFWADPDIFETTDYSFETLSRRFQEMAFLNKGLRINLTDERE
SAKATAGADEAGEDEKHEVKHVSYHYEGGIVDFVKYLNSRKGDVVHPTVIDLEAEDKDRS
LSLELAMQWNGGYTEGVYSFANIIHTHEGGTHEEGFRAALTSLINKYARDKKLLREKDDN
LTGDDIREGLTAIISVKLSEPQFEGQTKTKLGNTEVKTFVQKVVYEHLNDWLDRNPNEAA
DIIRKGIQAATARVAARKARDLTRRKGLLETASLPGKLSDCQSNDPTKCEIFIVEGDSAG
GSAKSGRNPEYQAILPIRGKILNVEKARIDKILQNQEIQALISAFGTGVHEDFDIEKLRY
HKIILMADADVDGQHISTLLLTFLFRFMRPLVEAGHVFLSRPPLYKIKWGRDEVEYAYSD
RERDALIELGRQRGKRIREDSIQRFKGLGEMNAEELRITTMDQEHRVLGQVTLDDAAQAD
DLFSVLMGEDVEARRQFIQRNAKDVRFLDI
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtgccagaaagggcgcttcgtggccgattccggcaaccccaacgagaacatcccg
tccaccgacgctgcggcgatctcgtcgaacggcgaggtcacagcctcgtacgacgccagt
gccatcaccgtcctcgagggtctggacgcggtccgcaagcgacccggtatgtacatcggc
tcaacaggtgagcgcggtctgcaccacctggtccaggaggtcgtcgacaactcggtcgac
gaggcgctggccggtcacgcggacaccatcgacgtcacgatcctcgccgacggcggcgta
cgcgtcatcgacaacggccgtggcatcccggtcggcatcgtcccctccgagggcaagccg
gccgtcgaggtcgtgctgacggtcctgcacgcgggcggaaagttcggtggcggcggctac
gcggtctccggcggtctgcacggcgtgggtgtctccgtcgtgaacgccctgtcgaccaag
gtgtccgtcgagatcaagaccgacggccaccgctggacgcaggactacaagttgggcgtc
ccgacggccccgctggcccagcacgaggccacggacgagcacggcaccacggtcaccttc
tgggccgacccggacatcttcgagaccaccgactactccttcgagacgctgtcacggcgc
ttccaggagatggcgttcctcaacaagggtctgcggatcaacctcaccgacgagcgcgag
tcggcgaaggccaccgccggcgcggacgaggcgggcgaggacgagaagcacgaggtcaag
cacgtctcgtaccactacgagggcggcatcgtcgacttcgtgaagtacctcaactcccgc
aagggagacgtggtgcaccccaccgtgatcgaccttgaggcggaggacaaggacaggagc
ctgtccctcgaactcgccatgcagtggaacggtggctacaccgagggcgtgtactccttc
gccaacatcatccacacgcacgagggcggcacgcacgaagagggcttccgggccgcgctg
acctcgctgatcaacaagtacgcgcgcgacaagaagctgctgcgggagaaggacgacaac
ctcacgggtgacgacatccgcgagggtctgaccgcgatcatctcggtgaagctgagtgaa
ccgcagttcgagggccagacgaagaccaagctgggcaacaccgaggtgaagaccttcgtc
cagaaggtcgtctacgagcacctcaacgactggctggaccgcaacccgaacgaggccgcg
gacatcatccgcaagggcatccaggcggccaccgcgcgcgtggcggcccgcaaggcccgt
gacctcacccgccgcaagggtctgctggagacggcctcccttccgggcaagctctccgac
tgccagtcgaacgaccccaccaagtgcgagatcttcatcgtcgagggtgactccgccggc
ggctcggccaagtccggccgcaaccccgagtaccaggcgatcctcccgatccgcggcaag
atcctgaacgtcgagaaggcgcggatcgacaagatcctccagaaccaggagatccaggcg
ctgatctcggccttcggtaccggagtccacgaggacttcgacatcgagaagctgcgctat
cacaagatcatcctgatggcggacgccgacgtcgacggccagcacatcagcaccctgctg
ctgaccttcctgttccgcttcatgcggccgctggtcgaggccgggcacgtgttcctgtcc
cgccccccgctctacaagatcaagtggggccgggacgaggtggagtacgcgtactccgac
cgcgagcgcgacgcgctgatcgagctgggccgccagcgcggcaagcgcatccgcgaggac
tcgatccagcgcttcaagggtctcggcgagatgaacgccgaggaactgcgcatcacgacc
atggaccaggagcaccgcgtcctcggtcaggtcaccctcgacgacgccgcccaggccgac
gacctgttctcggtcctgatgggcgaggacgtcgaggcgcgccgccagttcatccagcgc
aacgccaaggacgtccgcttcctcgacatctga
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