Streptomyces lincolnensis: SLINC_4279
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Entry
SLINC_4279 CDS
T04801
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sls
Streptomyces lincolnensis
Brite
KEGG Orthology (KO) [BR:
sls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sls03032
]
SLINC_4279
03400 DNA repair and recombination proteins [BR:
sls03400
]
SLINC_4279
Enzymes [BR:
sls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SLINC_4279
DNA replication proteins [BR:
sls03032
]
Prokaryotic type
DNA Topoisomerases
SLINC_4279
DNA repair and recombination proteins [BR:
sls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SLINC_4279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Ig_mannosidase
Motif
Other DBs
NCBI-ProteinID:
ANS66503
UniProt:
A0A1B1MDC1
LinkDB
All DBs
Position
5105249..5107858
Genome browser
AA seq
869 aa
AA seq
DB search
MTDETPDLSSGPLTPEEGGAIAQRVEPVGLETEMQRSYLDYAMSVIVSRALPDVRDGLKP
VHRRVLYAMYDGGYRPERGFYKCARVVGDVMGNYHPHGDSSIYDALVRLAQSWSMRMPLV
DSNGNFGSPGNDPAAAMRYTECKMAPLSMEMVRDIDEETVDFTDNYDGRSQEPTVLPARF
PNLLINGSAGIAVGMATNIPPHNLREVASGAQWYLENPEASHEELLDALIERIKGPDFPT
GALVVGRKGIEEAYRTGRGSITMRAVVAVEEIQNRQCLVVTELPYQTNPDNLAQKIADLV
KDGKVGGIADVRDETSSRTGQRLVIVLKRDAVAKVVLNNLYKHTDLQSNFSANMLALVDG
VPRTLSLDAFIRHWVTHQIEVIVRRTKFRLRKAEERAHILRGLLKALDAIDEVIALIRRS
DTVDIARTGLMELLAIDEIQANAILEMQLRRLAALERQKIVQEHDELQAKITEYNAILAS
PVRQRGIVSEELAAIVEKYGDDRKTMLVPYDGDMSIEDLIAEEDIVVTVTRGGYVKRTKT
VDYRAQKRGGKGVRGTKLKEDDIVDHFFVSTTHHWLLFFTNKGRVYRAKAYELPDAGREA
RGQHVANLLAFQPDEAIAEILAIRTYDVAPYLVLATKGGLVKKTPLKDYDSPRSGGVIAI
NLRETEDGSDDELIGAELVSSEDDLLLISKKAQSIRFTATDDALRPMGRATSGVKGMSFR
EGDQLLSMNVVRPGTFVFTATDGGYAKRTAVDEYRVQGRGGLGIKAAKIVEDRGSLVGAL
VVEETDEILAITLGGGVIRTRVNEVRETGRDTMGVQLINLGKRDAVVGIARNAEAGREAE
EVDGDVAVDETAEGVATTGTDEGEAPSTE
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgagaccccagacctttcttccggcccgctcacgcctgaagagggcggcgcc
atcgcccagcgtgtcgagcccgtcgggctcgagacggagatgcagcgctcgtacctcgac
tacgcgatgtccgtcatcgtctcccgcgcgctgccggacgtcagggacggcctcaagccc
gtccaccgccgcgtcctgtacgcgatgtacgacggcggctaccgccccgagcgcggcttc
tacaagtgcgcccgtgtcgtcggcgacgtcatgggcaactaccacccgcacggcgactcc
tcgatctacgacgcgctggtccgcctcgcgcagtcgtggtcgatgcggatgccgctggtg
gactccaacggcaacttcggctccccgggcaacgacccggcggcggccatgcgctacacc
gagtgcaagatggcgccgctgtcgatggagatggtccgtgacatcgacgaggagaccgtc
gacttcacggacaactacgacggccgctcccaggagccgaccgtcctgccggcgcgcttc
ccgaacctgctgatcaacggttcggccggtatcgcggtcggcatggccaccaacatcccc
ccgcacaacctgcgcgaggtcgcctccggcgcccagtggtacctggagaatcccgaggcc
tcgcacgaggagctcctggacgcgctcatcgagcgcatcaagggcccggacttcccgacc
ggcgcgctcgtcgtcggccgtaagggcatcgaagaggcctaccgcacgggccgtggctcc
atcaccatgcgggcggtcgtcgcggtcgaggagatccagaaccgccagtgcctggtggtc
acggaactgccgtaccagaccaaccccgacaatctcgctcagaagatcgccgacctggtg
aaggacggcaaggtcggcggcatcgcggacgtccgggacgagaccagctcccgtacgggt
cagcgtctcgtcatcgtcctgaagcgtgacgcggtcgccaaggtcgtactgaacaacctg
tacaagcacacggacctgcagtcgaacttcagcgccaacatgctggcgctggtcgacggt
gtgccgaggaccctctcgctggacgcgttcatccgccactgggtgacgcaccagatcgag
gtcatcgtccggcgtacgaagttccgtctgcgcaaggccgaggagcgggcgcacatcctg
cgcggtctgctcaaggccctggacgccatcgacgaggtcatcgcgctgatccggcgcagc
gacaccgtcgacatcgcgcgcacgggcctgatggagctcctggcgatcgacgagatccag
gcgaacgccatcctcgagatgcagctgcgccgactggccgccctggaacgtcagaagatc
gtccaggagcacgacgagctccaggcgaagatcaccgagtacaacgcgatcctggcctcg
ccggtccgccagcgcggcatcgtcagcgaggagctcgccgcgatcgtcgagaagtacggc
gacgaccgcaagaccatgctggtgccctacgacggtgacatgtccatcgaggacctgatc
gccgaggaggacatcgtcgtcacggtgacgcgcggcggttacgtcaagcgcaccaagacc
gtcgactaccgggcgcagaagcgcggcggcaagggcgtgcgcggtacgaagctcaaggaa
gacgacatcgtcgaccacttcttcgtgtcgaccacgcaccactggctgctgttcttcacc
aacaagggccgcgtctaccgggccaaggcctacgagctgccggacgccggccgggaggcg
cgtggacagcacgtcgccaacctgctggccttccagccggacgaggcgatcgccgagatc
ctcgccatccgcacctacgacgtggcgccgtaccttgtcttggccaccaagggtggtctg
gtgaagaagacgcctctgaaggattacgattcgccgcgttccggtggcgtcatcgcgatc
aacctccgggagacggaggacggttcggacgacgaactgatcggagccgaactcgtttca
tccgaggacgatctgcttctgatcagcaagaaggcgcagtcgatcaggttcacggcgacg
gatgacgcactccgtccgatgggccgcgcgacctcgggtgtcaagggcatgagcttccgt
gagggagaccagctgctctcgatgaatgttgttcgacccggtacgttcgtgttcactgcc
acagacggcgggtacgcgaagcggaccgccgtcgacgagtaccgcgtccagggtcgcggt
ggcctcggcatcaaggccgccaagatcgtggaggaccgtggttctctcgtcggcgcgctg
gtggtcgaggagaccgacgagatcctcgccatcacgctgggcggcggtgtgattcgtacg
cgagtcaacgaggtcagggagacgggccgtgacaccatgggcgtccaactgatcaacctg
ggcaagcgcgatgccgtggtcggtatcgcacgtaacgccgaggctgggcgcgaggcggag
gaggtcgacggcgatgtggccgtcgacgagaccgccgagggtgtcgcgaccaccggcacg
gacgagggcgaggcgccctcgaccgagtag
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