Streptomyces lincolnensis: SLINC_4361
Help
Entry
SLINC_4361 CDS
T04801
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sls
Streptomyces lincolnensis
Pathway
sls00040
Pentose and glucuronate interconversions
sls01100
Metabolic pathways
sls02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sls00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SLINC_4361
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SLINC_4361
Enzymes [BR:
sls01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SLINC_4361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ANS66585
UniProt:
A0A1B1MD90
LinkDB
All DBs
Position
5198263..5199609
Genome browser
AA seq
448 aa
AA seq
DB search
MATPSHRRSLRKRRTLLASAAAVAATGLGASYFVMSANADAVDLYHQTLAAKDGWASSGT
GTTGGTKADAAHTFTVSTRAQLVKALGSASDTTPRIIKVKGTIDANTDAAGKKLSCANYA
SGTGYSLTSYLKAYDPAVYGRSKLPSGTQETARAAAQKKQAANIVFKVPANTTLVGVPGT
KAGITGGMLQIQNVDNVIVRNLTFAATEDCFPQWDPTDGDEGNWNSNYDSVTLRGATHVW
ADHNTFTDAPRFDGANPEYFGREYQIHDGSLDITKSSDLVTVSRNQFTNHDKTMLIGSSD
SEPAGKLRVSIHHNVWKGIVQRAPLARVGQIHIYNNLYDVTPLNGYAVQYSINSRAKAQV
VAENNHWKVPAGVKVAKLLSGDGTGAIKGTGNQVNGTVTDLVAAYNAASSKDLKTTVNWT
PTLTAGLESSAKSLPTSLGATTGAGVLS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaccccctcgcaccgccgctccctccgcaagcgacgcaccctcctcgcctccgcc
gcagccgtcgcggcgaccggtctcggtgcctcgtacttcgtgatgagcgcgaacgcggac
gccgtcgacctgtaccaccagacgctcgccgccaaggacggctgggcctcctccggcacc
ggcacgaccggcggcacgaaggccgacgcggcgcacaccttcaccgtcagcacccgcgcg
cagctggtgaaggccctcggctcggcctccgacaccaccccgcggatcatcaaggtcaag
ggcaccatcgacgccaacaccgacgccgccggcaagaagctgagctgtgcgaactacgcg
tcgggtacgggctattcgctgacgtcgtacctgaaggcgtacgacccagcggtgtacggc
cgctccaagctgccgtcgggcacgcaggagacggcgcgggccgccgcgcagaagaagcag
gcggcgaacatcgtcttcaaggtgcccgccaacaccacgctcgtgggtgtgccggggacg
aaggccggcatcaccggcggcatgctccagatccagaacgtggacaacgtcatcgtccgc
aacctgaccttcgccgccaccgaggactgcttcccgcagtgggacccgaccgacggcgac
gagggcaactggaactccaactacgactccgtcaccctgcgcggcgcgacccacgtctgg
gcggaccacaacacgttcaccgacgccccgcgcttcgacggcgccaacccggagtacttc
ggccgcgagtaccagatccacgacggatccctggacatcaccaagagctccgacctggtg
accgtctcccgcaaccagttcaccaaccacgacaagacgatgctcatcggcagcagcgac
agcgagcccgccggcaagctgcgcgtctccatccaccacaacgtgtggaagggcatcgtc
cagcgggcgcccctggcccgcgtcggccagatccacatctacaacaacctctacgacgtg
acgcccctgaacggctacgcggtgcagtacagcatcaactcccgcgccaaggcccaggtc
gtcgcggagaacaaccactggaaggtcccggccggcgtgaaggtcgccaagctcctgagc
ggtgacggcaccggcgcgatcaagggcacgggcaaccaggtcaacggcacggtgacggac
ctggtcgccgcctacaacgccgcgtcctccaaggacctgaagaccacggtcaactggacg
ccgacgctgacggcggggctggagtcctcggcgaagagcctgccgacgtcgctgggggcg
acgacgggggcgggggtgctgtcgtaa
DBGET
integrated database retrieval system
