Streptomyces lincolnensis: SLINC_5127
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Entry
SLINC_5127 CDS
T04801
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sls
Streptomyces lincolnensis
Pathway
sls03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sls00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SLINC_5127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sls03019
]
SLINC_5127
03110 Chaperones and folding catalysts [BR:
sls03110
]
SLINC_5127
03029 Mitochondrial biogenesis [BR:
sls03029
]
SLINC_5127
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sls04147
]
SLINC_5127
Enzymes [BR:
sls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SLINC_5127
Messenger RNA biogenesis [BR:
sls03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SLINC_5127
Chaperones and folding catalysts [BR:
sls03110
]
Heat shock proteins
HSP60 / Chaperonin
SLINC_5127
Mitochondrial biogenesis [BR:
sls03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SLINC_5127
Exosome [BR:
sls04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SLINC_5127
Exosomal proteins of other body fluids (saliva and urine)
SLINC_5127
Exosomal proteins of breast cancer cells
SLINC_5127
Exosomal proteins of colorectal cancer cells
SLINC_5127
Exosomal proteins of bladder cancer cells
SLINC_5127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ANS67351
UniProt:
A0A1B1MFJ8
LinkDB
All DBs
Position
6094834..6096459
Genome browser
AA seq
541 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
IEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLKNVAAGASPALLKKGID
AAVAAVSEELLATARPIDEKSDIAAVAGLSAQDTQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYFVTDQERMEAVLDDPYILINQGKISSIQDLLPLLEKVIQ
TNSSKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLQDLAVLTGATV
ISEEVGLKLDQVGLDVLGSARRVTVTKDDTTVVDGAGNSADVTGRVAQIKAEIENTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HAAKVLEGGLGKTGDEATGVAVVRKAVVEPLRWIAENAGLEGYVITSKVAELDKGQGFNA
ATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEEPAAGGHSHGHS
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgccctcgagcgcggcgtcaac
aagcttgccgacacggtcaaggtgacgatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgcccccaccatcaccaacgacggtgtcacgatcgcccgcgaggtcgag
atcgaggacccgtacgagaacctcggcgcccagctggtgaaggaggtggcgaccaagacc
aacgacatcgcgggtgacggcaccaccaccgccaccgtgctcgcccaggcgctggtgcgc
gagggcctgaagaacgtcgccgcgggtgcctccccggcgctgctgaagaagggcatcgac
gcggccgtggccgcggtctccgaggagctcctcgcgaccgcccgcccgatcgacgagaag
tccgacatcgccgccgtcgccggtctgtccgcccaggacacgcaggtcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggtctggagctggacttcaccgagggcatggccttcgacaagggctacctgtcgccg
tacttcgtgacggaccaggagcgtatggaggccgtcctcgacgacccgtacatcctgatc
aaccagggcaagatctcctcgatccaggacctgctgccgcttcttgagaaggtcatccag
accaactcctccaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcg
accctggtcgtgaacaagatccgcggcaccttcaacgcggtcgcggtcaaggcccccggc
ttcggcgaccgccgcaaggcgatgctccaggacctggcggtcctcaccggcgccacggtc
atctccgaggaggtcggcctcaagctcgaccaggtcggcctggacgtgctgggctccgcc
cgccgcgtcacggtcaccaaggacgacacgaccgtcgtcgacggcgcaggcaactcggcg
gacgtcacgggccgcgtcgcccagatcaaggccgagatcgagaacaccgactccgactgg
gaccgcgagaagctccaggagcgcctcgcgaagctggccggcggcgtgtgcgtgatcaag
gtcggcgccgccaccgaggtggagctgaaggagaagaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgctctggtc
cacgccgcgaaggtccttgagggcggtctgggcaagaccggcgacgaggccaccggtgtc
gcggtcgtccgcaaggccgtcgtcgagccgctgcgctggatcgccgagaacgccggcctg
gagggctacgtcatcacctccaaggtcgccgagctcgacaagggccagggcttcaacgcc
gccaccggcgagtacggcgacctggtcaaggccggcgtcatcgacccggtcaaggtcacc
cgctccgccctggagaacgccgcctccatcgcctccctcctcctgacgaccgagaccctg
gtcgtcgagaagaaggaagaggaggagccggccgccggtggtcacagccacggccactcc
cactga
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integrated database retrieval system