Streptomyces lincolnensis: SLINC_5165
Help
Entry
SLINC_5165 CDS
T04801
Name
(GenBank) ATP-dependent DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sls
Streptomyces lincolnensis
Pathway
sls03420
Nucleotide excision repair
sls03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SLINC_5165
03430 Mismatch repair
SLINC_5165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sls03400
]
SLINC_5165
Enzymes [BR:
sls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SLINC_5165
DNA repair and recombination proteins [BR:
sls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SLINC_5165
MMR (mismatch excision repair)
Other MMR factors
SLINC_5165
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
ANS67389
UniProt:
A0A1B1MFK4
LinkDB
All DBs
Position
6147632..6150046
Genome browser
AA seq
804 aa
AA seq
DB search
MPEPVPDDLFGGKFDVPPDRDAYYRDGAPRPAVDPATLLEGLNENQRAAVVHSGAPLLIV
AGAGSGKTRVLTHRIAHLLGERNVHPGQILAITFTNKAAGEMKERVEQLVGPRANAMWVM
TFHSACVRILRRESKKLGFTSSFSIYDAADSKRLMALVCRDLDLDPKRFPPKSFSAKISN
LKNELIDEEDFAAQATDGFEKTLAQAYALYQSRLREANALDFDDLIMTTVNLLRAFPDVA
EHYRRRFRHVLVDEYQDTNHAQYTLVRELVGTGSRADDADVPPNDHDVPPAELCVVGDAD
QSIYAFRGATIRNILQFEEDYPDATTILLEQNYRSTQTILTAANAVIERNESRRPKNLWT
NAGAGARITGYVADTEHDEAQFVAEEIDRLTDAGDAKAGDVAVFYRTNAQSRVFEEIFIR
VGLPYKVVGGVRFYERKEVRDVLAYLRVLANPEDSVPLRRILNVPKRGIGERAEAMIDAL
SQREKISFPQALKRVDEAYGMAARSTNAVKRFNVLMEELRTIVESGAGPATVLEAVLERT
GYLAELQASTDPQDETRIENLQELAAVALEFEQESGEAAEGEAAAPVGLAAFLERVALVA
DSDQIPDEDEDGSGVITLMTLHTAKGLEFPVVFLTGMEDGVFPHMRALGQTKELEEERRL
AYVGITRARERLYLTRSSMRSAWGQPSYNPPSRFLEEIPGQHVDWKRTGATSPVSAGPVS
AVAASLSSSRSRSSASGASGFATRRASEKPVVSLAVGDRVTHDQFGLGTVTGVKGTGANA
EATIDFGDTKPKRLLLRYAPVEKL
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
gtgccggagcccgtgccggatgatctgttcggcgggaagttcgacgtgccgccggaccgg
gacgcctactaccgcgacggcgccccgcgcccggcggtggacccggccacgctcctggag
gggctgaacgagaaccagcgcgccgccgtcgtgcactccggcgcgcccctgctcatcgtg
gccggcgccggctccggcaagacccgggtgctcacccaccggatcgcccacctgctcggc
gagcggaacgtccatccgggccagatcctcgcgatcaccttcaccaacaaggccgcgggc
gagatgaaggagcgcgtggagcagctcgtcggcccgcgcgcgaacgcgatgtgggtgatg
accttccacagcgcgtgcgtgcggatcctgcgcagggagtcgaagaagctcggcttcacg
tcctccttctcgatctacgacgcggccgactccaagcgcctgatggccctggtctgccgc
gacctggacctcgaccccaagcgcttcccgccgaagtccttcagcgccaagatcagcaac
ctgaagaacgagctgatcgacgaggaggacttcgccgcccaggccaccgacggcttcgag
aagaccctcgcccaggcctacgcgctctaccagtcccgcctgcgcgaggccaacgcgctc
gacttcgacgacctgatcatgacgacggtcaacctgctccgcgccttccccgacgtcgcc
gagcactaccgccgccgcttccgccatgtcctcgtcgacgagtaccaggacaccaaccac
gcgcagtacaccctggtcagggagctcgtcggcaccggttcgcgcgccgacgacgccgac
gtccccccgaacgaccacgacgtcccgcccgccgagctctgcgtcgtcggcgacgccgac
cagtcgatctacgccttccgcggcgcgacgatccgcaacatcctccagttcgaggaggac
tacccggacgcgacgacgatcctcctggagcagaactaccgctccacgcagaccatcctc
accgccgccaacgcggtcatcgagcgcaacgagtcccgtcgccccaagaacctgtggacc
aacgcgggcgcgggcgcgcgcatcaccggctatgtcgccgacaccgagcacgacgaggcg
cagttcgtcgccgaggagatagaccgcctcaccgacgcgggcgacgcgaaggccggcgat
gtcgccgtcttctaccggaccaacgcgcagtcccgtgtcttcgaggagatcttcatccgc
gtcggcctgccctacaaggtcgtcggcggtgtccgcttctacgagcgcaaggaggtccgg
gacgtcctggcctacctgcgggtgctggccaacccggaggactcggtaccgctgcgccgc
atcctcaacgtccccaagcggggcatcggcgagcgcgccgaggcgatgatcgacgccctg
tcccagcgggagaagatcagcttcccgcaggcgctgaagcgggtcgacgaggcgtacggc
atggccgcgcggtcgacgaacgccgtgaagcggttcaacgtgctgatggaggagctccgt
accatcgtcgagtccggcgccggaccggcgaccgtcctggaggcggtgctcgaacgcacc
ggctacctcgccgagttgcaggcctccaccgacccgcaggacgagacccggatcgagaac
ctccaggaactcgccgccgtggccctggagttcgagcaggagtccggggaagccgcggaa
ggtgaggcggcggctccggtcggtctcgccgcgttcctcgagcgggtcgcgctcgtcgcc
gactccgaccagatccccgacgaggacgaggacggctccggcgtcatcaccctgatgacc
ctgcacaccgccaagggcctggagttcccggtcgtcttcctcaccggcatggaggacggc
gtcttcccgcacatgcgcgccctcggccagaccaaggaactggaggaggagcggcgcctg
gcgtacgtcggcatcacgcgcgcgcgggaacggctgtatctgacgcggtcctcgatgcgc
agtgcgtgggggcagccgtcgtacaacccgccctcccgcttcctggaggagatccccggg
cagcacgtcgactggaagcggaccggtgccacctcacccgtgtccgcgggcccggtgtcc
gcggtggcggcctcgctgtcctcgtcccgctcccggtcgtccgcctcgggcgcgagcggc
ttcgccacgcgccgcgcctccgagaagccggtggtgtccctggccgtcggcgaccgggtc
acccacgaccagttcgggctcggcaccgtgacgggcgtgaagggcacgggggcgaacgcc
gaggcgacgatcgacttcggggacaccaagccgaagcggctcctgctgcggtacgcgccg
gtggagaagctgtaa
DBGET
integrated database retrieval system
