Streptomyces lincolnensis: SLINC_5569
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Entry
SLINC_5569 CDS
T04801
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sls
Streptomyces lincolnensis
Pathway
sls03420
Nucleotide excision repair
sls03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SLINC_5569
03430 Mismatch repair
SLINC_5569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sls03400
]
SLINC_5569
Enzymes [BR:
sls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SLINC_5569
DNA repair and recombination proteins [BR:
sls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SLINC_5569
MMR (mismatch excision repair)
Other MMR factors
SLINC_5569
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ANS67793
UniProt:
A0A1B1MH15
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All DBs
Position
6632693..6636331
Genome browser
AA seq
1212 aa
AA seq
DB search
MPARITDPDQLKELLGIPFTPEQTACITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALIKAGVTDPDVIDPDNPPGEPVISTYHAFAGRLL
ADHGLRIGLEPTSRLLADATRFQLAARVLREAPGPYPALTRSFADLVSDLLALDAELAEH
LVRPGTLQSYDVELLRTLEGVRLTNDALRKVPEAAAARRELAGLVVRYRAAKRERDLLDF
GDQIALSAQLAQIPEVGRVLREEFRVVLLDEYQDTSVAQRILLAGLFGGGTGHPVTAVGD
PCQAIYGWRGASVANLDDFPEHFAHADGRSATRQSLSENRRSGGRLLDLANGLAEPLRAL
HAGVEALRPAPGAERDGLVRCALLRTHAEEIDWIADSVAHLVGTGKAPGEIAVLCRTATD
FAGIQGALVARDVPVEVVGLSGLLHLPEIADLVAVCEVLQDPGANASLVRLLTGPRWRIG
PRDLALLGRRARFLVSHARVDGDDPDRRLAEAVEGVDPSEVISLADALDTFLETPFYGTD
AEGDDDGLPFSPDARVRFARLAAELRDLRRSLADPLMDVLHRVLTVTGLEVELSASPHAL
AARRRETLSNFLDVAASFAAGDGEATLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTA
HKSKGLEWDVVAVPGLVTGTFPSTQGREKWTAQGKVLPHDLRGDAETLPDVTSWDSRGLK
AFQEAMKDHQHTEELRLGYVTFTRPRSLLLGSGHWWGPTQKKPRGPSDFLRELYDHCAAG
YGEIEAWADEPAEGEENPVLHQESADQVWPLPLDDTALARRRAAAETVLAHLEDLAASHT
DTHPAATHSPDTYDDPDWPTPPDEEEPPYGEPPYGEPPHEDEAFPEAFEDAADAADSADH
AGPDDPEFSEDPGHDDWDTWTTARPAVPHQATAPDTNGHAGAPEGPRAHPTEPDTRPAPP
RAREDRPTRLTPEEARTLASWDRDLDALTGELLRAREGVTDVLLPSSLTASQLMSLAADP
DGFAQELARPMPRPPQPAARRGTRFHAWVESRFEELTLPMLEPEELPGSEAEIADERDLE
ALKDAFERTEYARRTPYRVEAPFQLEIAGRVIRGRIDAVYKEGDGAETTYEIVDWKTNRT
RTADPLQLAVYRLAWAEQRGVPPQSVTATFLYVRSGEVVRPDDLPDRAALERLLLAEPGG
EEPHDEDVGAGR
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccgtatcaccgatcccgatcagctcaaggagctcctcggtatcccgttcacc
ccggagcagacggcctgcatcaccgcgccgcccgcaccgcaggtgatcgtggccggagcg
gggtcgggcaagacgacggtgatggcggcccgcgtggtctggctggtcggcaccggccag
gtcgcccccgaacaggtgctcgggctgacgttcaccaacaaggccgccggcgaactcgcc
gagcgggtgcgcaaggcgctgatcaaggcgggcgtcaccgaccccgatgtcatcgacccg
gacaatcccccgggcgaaccggtgatctcgacctaccacgccttcgcgggccgcctgctg
gccgaccacggcctgcgcatcggcctggagccgacctcccggctgctcgccgacgccacc
cgtttccagctcgccgcccgggtgctgcgcgaggcaccggggccctacccggccctcacc
cgctccttcgccgacctggtcagcgacctcctcgcgctggacgccgaactcgccgaacac
ctggtccggcccgggaccctccagtcgtacgacgtcgagctgctgcgcaccctggagggc
gtcaggctcaccaacgacgccctgcgcaaggtccccgaggcggccgccgcccgccgtgaa
ctcgcgggcctggtggtccgctaccgcgccgccaagcgcgaacgcgatctgctcgacttc
ggcgaccagatcgccctgtccgcccagctcgcgcagatccccgaggtgggccgcgtcctg
cgggaggagttccgcgtggtgctcctcgacgagtaccaggacacgtccgtggcccaacgc
atcctcctggcgggcctgttcgggggcggcaccggacatccggtcaccgccgtcggcgac
ccctgccaggccatctacggctggcggggcgcctcggtcgccaacctcgacgacttcccg
gagcacttcgcccacgccgacgggcgctccgccacccgccagtcgctcagcgagaaccgc
cgcagcggcggccgcctcctggacctcgccaacggcctcgccgagcccctgcgcgccctg
cacgcgggcgtggaggccctgcgccccgcgcccggcgccgaacgcgacggactggtgcgc
tgcgccctgctgcgcacccacgccgaggagatcgactggatcgccgactccgtcgcgcac
ctcgtggggaccgggaaggcgcccggtgagatcgccgtcctgtgccgtaccgccaccgac
ttcgccgggatccagggcgcgctcgtcgcccgggacgtgcccgtcgaggtcgtcggtctc
tccggtctgctgcacctgcccgagatcgccgacctggtcgccgtctgcgaggtcctccag
gaccccggagccaacgcctccctggtccgcctgctgaccggaccgcgctggcgcatcggc
ccgcgcgacctcgccctcctgggacgccgcgcccggttcctggtgtcccacgcgcgcgtg
gacggcgacgaccccgaccgccgcctcgccgaggccgtcgagggggtcgacccctccgag
gtgatatcgctcgcggacgccctcgacacgttcctggagacacccttctacggcacggac
gcggaaggggacgacgacgggctgcccttctccccggacgcgcgcgtgcggttcgcccgc
ctggccgccgaactgcgcgacctgcgccgctcgctggccgaccccctgatggacgtcctg
caccgcgtcctgaccgtcaccggcctggaggtcgagctctcggcgtccccgcacgccctg
gccgcccgccgtcgcgagaccctgtcgaacttcctcgacgtcgccgcctcgttcgcggcc
ggcgacggcgaggccaccctgctggccttcctgggcttcctgcgcaccgccgcccagtac
gagaagggcctcgacaacgccctcccgggcggcgagaacaccgtcaaggtgctcaccgcg
cacaagtccaagggtctggaatgggacgtggtggccgtccccggcctggtcaccggcacg
ttccccagcacgcagggccgcgagaagtggaccgcccagggcaaggtgctcccgcacgac
ctgcgcggcgacgccgagaccctgcccgacgtcacctcctgggactcccgcggcctgaag
gccttccaggaggccatgaaggaccaccagcacaccgaggaactccgcctcggctacgtc
accttcacccgcccccgctcactcctcctcggctccggccactggtggggccccacccag
aagaagccgcgcggtccgtccgacttcctgcgggagctgtacgaccactgcgcggcgggc
tacggcgagatcgaggcctgggccgacgaaccggccgagggcgaggagaaccccgtcctg
caccaggagtccgccgaccaggtgtggcccctgccgctggacgacaccgccctggcccgg
cgccgggcggccgccgagacggtcctcgcccacctggaggacctcgccgcctcccacacc
gacacccacccggcggccacccacagtccggacacctacgacgacccggactggccgaca
cctcccgacgaggaggagccgccgtacggagaaccgccttacggggagccgccccacgag
gacgaggcgttcccggaggccttcgaagacgcggcggacgcggcagactccgcagatcac
gcgggccccgacgaccccgagttctccgaggatcccgggcacgacgactgggacacctgg
acgacggcccgcccggccgtcccgcaccaggccacagccccggacacgaacggccacgcg
ggtgcgcccgagggtccgcgcgcccaccccacggagcccgacacccgacccgcaccaccc
cgcgctcgggaggaccggcccacccgcctcaccccggaggaggcccgcaccctcgcctcc
tgggaccgcgacctcgacgccctcaccggcgagctcctgcgcgcccgcgaaggcgtcacc
gacgtcctcctgccctcgtcgctgaccgcgtcccagctgatgagcctggccgccgatccc
gacggcttcgcccaggagctggcccgcccgatgccccgcccgccgcagcccgccgcccgt
cgcggcacccgcttccacgcctgggtcgagtcccgcttcgaggaactcaccctgcccatg
ctggagccggaggaactgcccggaagcgaggccgagatcgccgacgaacgcgacctggaa
gccctcaaggacgccttcgaacgcaccgagtacgcccggcgcacgccctaccgcgtcgag
gcgcccttccagctggagatcgcgggacgggtgatccggggacgtatcgacgccgtctac
aaggagggcgacggcgcggagacgacgtacgagatcgtcgactggaagaccaaccgcacc
cgcaccgccgacccgctccagctcgccgtctaccggctcgcctgggccgagcagcggggc
gtgcccccgcagtcggtcacggccaccttcctgtacgtgcgcagcggcgaggtcgtccgg
cccgacgacctgccggaccgtgcggccctggagcggctcctgctggcggagccggggggt
gaggaaccgcacgacgaggatgtcggtgcgggccgatag
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