KEGG   Streptomyces lincolnensis: SLINC_6170
Entry
SLINC_6170        CDS       T04801                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sls  Streptomyces lincolnensis
Brite
KEGG Orthology (KO) [BR:sls00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sls03400]
    SLINC_6170
Enzymes [BR:sls01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SLINC_6170
    5.6.2.6  RNA 3'-5' helicase
     SLINC_6170
DNA repair and recombination proteins [BR:sls03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SLINC_6170
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_2nd_Lhr WHD_3rd_Lhr DEAD WHD_4th_Lhr Helicase_C ResIII AAA_25 DUF6406 PhoH
Other DBs
NCBI-ProteinID: ANS68394
UniProt: A0A1B1MIJ8
LinkDB
Position
complement(7367339..7372270)
AA seq 1643 aa
MVSDTRQALNGFSPATRGWFAGAFDAPTTAQAGAWQAIREGSDVLVVAPTGSGKTLAAFL
AALDQLTSTPPPADPRKRCRVLYVSPLKALAVDVERNLRSPLTGIRQESVRLGLPEPEVK
VGIRSGDTPAAERRALSTRPPDILITTPESLFLMLTSATRDALTGIETVILDEVHAVAGT
KRGAHLALSLERLDGILKKPARRIGLSATVRPVDEVARYLSPHRKVEIVQPKSGKEFDLS
VVVPVEDLAELAGSPVSDATDGAERPSIWPHVEERIADLVQSHRSTIVFANSRRLAERLC
NRLNEIAYERATGEPLDEHHAPAELMGGSGAAQGAPPVIARAHHGSVSKEQRALVEEDLK
AGRLPAVVATSSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAGHQVGAVSTGVVFPKY
RGDLVQAAVVTERMRTGSIESLRIPSNPLDVLAQQIVAMTALDTWQFDDLLATVRRAAPF
ASLPESAFTAVLDMLAGRYPSDAFAELRPRVVWDRVAGTITGRPGAQRLAVTSGGTIPDR
GLFGVFLAGSDPKKGGGRVGELDEEMVYESRVGDVFTLGTSSWRIEDITRDRVLVSPAPG
VPGRLPFWKGDQLGRPLELGRALGAFLREVGSLPKDKARARLLAAGLDTWASDNVLSYLH
EQREACGHVPDDRTIVVERFRDELGDWRVVVHSPFGAQVHAPWALALGAKLSERYGMDAQ
VMHADDGIVLRLPDADLMGLDLLDQEPTRAGTEYDADQAPVGAADVVFDKGEVDQIVTDQ
VGGSALFASRFRECAARALLLPRRSPGKRTPLWQQRQRAAQLLQVASEFGSFPIVLEAVR
ECLQDVFDVPGLVELMGDLESRKVRLVEVTTPEPSPFARSLLFGYVAQFLYEGDSPLAER
RAAALSLDSRLLAELLGQAELRELLDAEVLTELEQELQWLTEDRRIKDVEGVADLLRVLG
PLTDAELAERGAEPPWAGELAKARRAIKVRLAGVDHWAAIEDAGRLRDALGTALPVGVPE
AFTEPVKDPLGDLLARFARTHGPFTSTTAAARFGLGVAVTEGALQRLAAGGRVVQGEFHP
AGIGQEWCDATVLRRLRRRSLAALRHELEPVPAPALAQFLPQWQHIGKGHSLRGIDGLVR
AVEQLQGASVPASALEKLVLPSRVATYTPAMLDELTTAGELVWAGAGALPGKDGWVSLYV
ADAAPLLLPPPHPLELTALHQSVLDALSGGYGLFFRQIADQVRATTHPDATDPQLADVIW
DLAWSGRLTNDTLAPMRALLGSGRTAGSTAHRAKRTVPRGRYGSLTAAARPASRTGPPTV
AGRWSLLPERDADPTLRAHALARVLLDRHGVVTRGAVSAEGIEGGFSAVYRILSAFEDSG
QARRGYVVEGLGAAQFAMDGAVDRLRAAANARDRGEPLPAPPQGDGIPDPFDTNGPAPAD
ATTNPYAPALDPAFGDDWPPSPTTPSEWVSPRDFHPPNGPASGQYDTQNPYAPYSSPGNG
LPTDRRTGLRSTPASRATVLAAADPANAYGAALPWPEPPTGAGHKPGRKAGSLVVLVDGE
LTLYMERGGKTLLAWPTAPDEDPTADPRLQAAAEALATAAKAGSLGTVTVERVNGASALT
SPLGALLEGAGFIATPRGLRLRA
NT seq 4932 nt   +upstreamnt  +downstreamnt
atggtcagcgacacacgccaagccctgaacggcttctcccccgccacccgcggctggttc
gcgggcgccttcgacgcgcccaccaccgcccaggcaggcgcgtggcaagccatcagagag
ggctcggacgtcctcgtcgtcgcccccaccggctccggcaagaccctcgccgccttcctc
gccgccctggaccagctcacctccacacccccacccgccgaccccaggaaacgctgccgc
gtcctgtacgtctcccccctcaaggccctcgccgtggacgtggagcgcaacctccgcagc
cccctgaccggcatccgccaggaatccgtccgcctcggcctgcccgagccggaggtcaag
gtgggcatccgctccggcgacacccccgccgccgagcgccgcgccctgtccacccgcccc
ccggacatcctgatcaccacccccgagtccctgttcctgatgctgacgtcggccacccgc
gacgccctgaccggcatcgaaaccgtcatcctcgacgaggtccacgcggtggccggcacc
aagcgcggcgcccacctcgcactctccctcgaacgtctggacggaatcctcaagaagccg
gcccgccgcatcggcctctccgcgaccgtccgcccggtcgacgaggtagcccgctacctc
tccccccaccgcaaggtggagatcgtccagccgaagtccggcaaggaattcgacctctcc
gtggtggtcccggtggaggacctcgccgagctggcgggctccccggtctccgacgccacc
gacggtgcggaacgcccctcgatctggccacacgtggaggagcggatcgccgacctggtc
cagtcccaccgctccacgatcgtcttcgccaactcccgccgcctcgcggagcgactctgc
aaccgcctcaacgagatcgcgtacgaacgggccaccggcgaacccctcgacgaacaccac
gccccggcggagctcatgggcggctcgggcgccgcgcagggcgcgcctccggtcatcgcc
agggcccaccacggctcggtctccaaggaacagcgcgccctcgtcgaggaggatctcaag
gcgggccgcctccccgccgtcgtggccacctccagccttgagctcggcattgacatgggc
gcggtggatctcgtcgtccaggtcgagtcacccccctccgtggcctccggcctccagcgc
gtgggccgcgcgggacaccaggtgggagcggtctcgaccggcgtggtcttccccaagtac
cgcggcgacctcgtccaggccgcggtcgtgaccgaacgcatgcggaccggctcgatcgaa
tccctgaggatcccctccaaccccctggacgtcctggcccagcagatcgtggccatgacg
gcactcgacacctggcagttcgacgacctcctcgccacggtccgccgagccgcccccttc
gcgtccctccccgaatccgccttcacggcggtcctcgacatgctcgccggccgctacccg
tccgacgccttcgcggagctacgcccgcgcgtggtctgggaccgggtcgccggcacgatc
accggccgccccggcgcacaacggctcgccgtcacctcgggcggcacgatccccgaccgg
ggtctcttcggcgtcttcctggccggctccgacccgaagaagggcggcggccgcgtcggc
gagctggacgaggagatggtctacgaatcccgcgtcggcgatgtcttcaccctcggcacc
agctcctggcgcatcgaggacatcacccgcgaccgtgtcctggtctcccccgcgccgggg
gtgccgggcaggctccccttctggaagggcgaccagctgggccgcccactcgaactgggc
cgcgcactcggcgcgttcctccgcgaggtcggctcgctcccgaaggacaaggcccgcgcg
cgcctcctcgccgcgggcctggacacctgggcctccgacaacgtcctgtcctacctgcac
gaacagcgcgaggcctgcggccacgtcccggacgaccgcacgatcgtcgtggaacgcttc
cgcgacgaactcggcgactggcgcgtggtcgtccactcccccttcggcgcccaggtgcac
gccccgtgggcgctggcgctcggcgccaagctctccgagcgctacggcatggacgcccag
gtcatgcacgccgacgacggcatcgtgctccggttgcccgacgccgacctcatgggcctg
gacctcctggaccaggaaccgacgagggccggtacggagtacgacgccgaccaggcgccc
gtaggcgcggcggacgtcgtcttcgacaagggcgaggtcgaccagatcgtcaccgaccag
gtgggcggctcggccctgttcgcgtcccgtttccgggagtgcgccgcccgcgcgctgctg
ctgccgcgccgcagccccggcaagcgcaccccgctgtggcagcagcgccagcgcgccgcc
caactgctccaggtggcgagcgagttcggctcgttcccgatcgtcctggaggcggtgcgc
gagtgcctccaggacgtcttcgacgtccccggcctggtcgagctgatgggcgacctggag
tcccgcaaggtgcgtctggtcgaggtcaccacccccgagccgtcccccttcgcgcgctcc
ctcctcttcgggtacgtcgcccagttcctgtacgagggggactcgccgctggccgaacgc
cgggccgcagcgctctcgctggactcccgtctgctggccgaactgctcggccaggcggag
ctgcgcgaactgctcgacgccgaggtgctgaccgagctggagcaggagctccagtggctc
acggaggaccgtcggatcaaggacgtcgagggcgtcgcggaccttctccgcgtcctcggc
ccgctcaccgacgcagagctggccgagcggggcgccgagccgccgtgggcaggggagctc
gccaaggcccgtcgtgcgatcaaggtcaggctcgccggtgtcgaccactgggcggcgatc
gaggacgcgggccgtctgcgcgacgcgctcggcacggccctcccggtcggtgtccccgag
gccttcaccgagccggtcaaggaccccctcggcgacctcctcgcgcgctttgcccgcacc
catggccccttcacgtccaccaccgcggcggcccgcttcggcctgggcgtggcggtcacc
gagggcgccctgcaacggctcgccgcggggggcagggtcgtccagggcgagttccacccg
gctggtatcggccaggagtggtgcgacgcgacggtactgcgccgcctccgccgccgctcc
ctggccgccctgcgccacgaactggagccggtgccggcgcccgcgctggcgcagttcctc
ccccagtggcagcacatcggcaagggtcacagtctgcgcggcatcgacggactggtgcgt
gctgtggagcagttgcagggcgcgtccgtgcccgcctccgccctggagaagctggtcctg
ccgtcccgcgtggcgacctacaccccggcgatgctcgacgagctcaccacggccggagaa
ctcgtgtgggcaggcgccggagccctccccggcaaggacggctgggtctccctctacgtg
gcggacgcggcccccctgctcctccctccgccccaccccctggagctgacggcacttcac
cagtccgtcctggacgccctgtccggcggctacggcctgttcttccgccagatcgccgac
caggtccgtgccaccacccatccagacgccaccgatccccaactggccgacgtcatctgg
gatctggcctggtcgggacggctcacgaacgacacgctcgcccccatgcgcgccctgctc
ggctcgggccgcaccgcgggctccaccgcccaccgcgccaagcgcaccgtcccacgcggc
cgctacggctccctcacggccgccgcccgccccgcctcccgcaccggccctccgaccgtc
gccggtcgctggtccctgctccccgagcgcgacgccgaccccacgctccgcgcccacgcc
ctggcccgcgtcctcctcgaccggcacggcgtggtgacccggggagcggtctccgcggag
ggcatcgagggcggtttctcggcggtgtaccgcatcctgtccgccttcgaggacagcggt
caggcccgtcgcggctatgtggtcgagggactcggtgccgcccagttcgcgatggacggc
gcggtcgaccgcctgcgtgcggcggcgaacgcccgcgaccgcggcgaaccccttccggca
ccgccccagggcgacggcatccccgaccccttcgacaccaacggcccggccccggccgac
gccaccacgaacccgtacgcccccgctctcgaccccgccttcggtgacgactggcccccc
tcccccaccacaccgagcgagtgggtctccccccgcgacttccacccgccgaacggcccc
gcatccggccagtacgacacccagaacccgtacgccccctacagctcccccggaaacggc
ctccccaccgaccgccgaaccggcctccgttccaccccggcctcccgagccaccgtcctg
gccgccgccgaccccgccaacgcctacggtgccgccctcccctggccggagccccccacc
ggcgccgggcacaagccgggccgcaaggcgggctccctggtcgtcctggtcgacggcgaa
ctgacgctctacatggaacgcggcggcaagaccctcctggcctggcccaccgcacccgac
gaggaccccaccgccgacccccgtctccaggcagcggccgaagccctcgccacggccgcc
aaggccggttctctcggcacggtcacggtggagcgcgtcaacggcgcctcggccctcacc
tcccccctcggcgccctcctggaaggagcgggtttcatcgccaccccacgcggcctgcgc
ctacgagcgtga

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