Streptomyces lincolnensis: SLINC_6564
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Entry
SLINC_6564 CDS
T04801
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sls
Streptomyces lincolnensis
Pathway
sls03030
DNA replication
sls03430
Mismatch repair
sls03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SLINC_6564
03430 Mismatch repair
SLINC_6564
03440 Homologous recombination
SLINC_6564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sls03032
]
SLINC_6564
03400 DNA repair and recombination proteins [BR:
sls03400
]
SLINC_6564
Enzymes [BR:
sls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SLINC_6564
DNA replication proteins [BR:
sls03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SLINC_6564
DNA repair and recombination proteins [BR:
sls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SLINC_6564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ANS68788
UniProt:
A0A1B1MJL7
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All DBs
Position
7882014..7882736
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AA seq
240 aa
AA seq
DB search
MGWHRELLIGFDLETTGTDPREARIVTGAVIEVRAGQPMGRREWLADPGVEIPADAVAVH
GISNERASAEGRPADQVADAIADVLTTYWKTGVPVVAYNAAFDLTLLSAELRRHGLPSLR
DRLGGLDPAPVIDPYTIDRRVDRYRRGKRNLEAVCEEYGIVLGSAHDASADALAAARLAC
AIAARHPKVAALGPAELHLRQIEWYAEWAADFQSFLRRKGDAAAVVDGVWPLRELADETV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgggctggcaccgggagctgctgatcggcttcgacctggagacgaccgggaccgatccg
cgcgaggcgcgcatcgtcacgggtgccgtgatcgaggtcagagccggacagcccatgggg
cgccgggagtggctggccgatccgggcgtggagatcccggcggacgcggtggcggtgcac
ggcatcagcaatgagcgcgcgagcgccgagggccgccccgccgaccaggtggcggacgcc
atcgccgacgtcctgacgacgtactggaagacgggcgtgccggtcgtcgcctacaacgcg
gccttcgacctgaccctgctctccgccgaactgcgccgccacggcctgccgtccctgcgc
gaccgcctcggcggcctcgaccccgcccccgtcatcgacccgtacaccatcgaccgccgg
gtcgaccgctaccgccgcggcaagcgcaacctcgaagcggtctgcgaggagtacggcatc
gtgctcggctccgcccacgacgcctcggccgacgccctcgccgcggcccggctggcctgc
gcgatagccgcccgccaccccaaggtcgcggccctcggcccggcggaactgcacctccgt
cagatcgagtggtacgccgagtgggcggccgacttccagagcttcctgcgccgcaagggc
gacgcggcggcggtggtcgacggcgtgtggccgctgcgcgagctcgccgacgagacggtg
tga
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