Sideroxydans lithotrophicus: Slit_0010
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Entry
Slit_0010 CDS
T01196
Name
(GenBank) sun protein
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
slt
Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slt03009
]
Slit_0010
Enzymes [BR:
slt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
Slit_0010
Ribosome biogenesis [BR:
slt03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Slit_0010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_31
Methyltransf_25
FtsJ
MTS
Motif
Other DBs
NCBI-ProteinID:
ADE10252
UniProt:
D5CTE6
LinkDB
All DBs
Position
12462..13736
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AA seq
424 aa
AA seq
DB search
MQHIQIEAAKAVHKVVHGGRNLTQVLSETLRKESKLTAQEKGALQDLCYGTLRYYSRLAY
MLDSLLQRPVREPLLGSLLMVAIYQLEHTKAGKHVIVDQAVHAAKNTNPAASGLVNAVLR
NYLRRQSVLREAANQKEESHYAYRQWWINALKAQYGEQAAEIMQAGNRHPPMTLRVNARH
TTAPGYQTVLAAQDIAAQIVEPDALILECPVPVEKLPKFNEGWVSVQDAGAQYAAHFLDV
HDGMRVLDACAAPGGKTAHLLELADIELLAVDKDELRLGRVRENLQRLKLDAQVVCGDAA
SPEDWWDGKAFERILADVPCSASGVVRRHPDIKWLRRQEDIANFAVQQAQVLESLWSLLA
SDGKLLYATCSVFARENQQVVAEFLARHDDASKIELSATGMIDGQLLPDREHDGFFYALL
HKQA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatatacagatagaagcagcgaaagcagttcacaaggttgttcacggtggtcgc
aacctcacacaggtattaagcgagacactgcgaaaagaaagcaaactaacagcgcaagaa
aaaggtgcattgcaagacctttgctatggcacattgcgctattactcacgattggcatac
atgctggatagccttttgcagcgccccgtgcgggagcctctgctgggcagtctgttaatg
gttgcgatctatcagctggagcataccaaggcaggaaagcatgtcattgtcgatcaggcg
gttcatgccgctaaaaacaccaaccccgctgcaagcggcttggtcaatgcggtgttacgc
aactacttgcgcaggcagtccgtcttgagggaggctgccaatcagaaggaagaaagccat
tacgcttatagacaatggtggatcaatgcacttaaagcccaatacggggagcaggcagca
gagataatgcaagccggaaaccggcatccacctatgactttgcgcgtcaatgcaagacat
accacagcaccaggctaccagacggtactggcagcgcaggatatcgctgcacaaatagtc
gaaccagatgcattgatccttgagtgtccggtgccagtggaaaagcttcccaaattcaac
gaaggctgggtctcggttcaggatgccggagctcaatacgcggcacatttcctggatgta
catgacgggatgcgggttttggatgcgtgcgcggctccaggcggtaaaactgcccacttg
ctggaattggcggatatcgaactgttggcggtcgataaggacgaattgcggctggggcga
gtcagagaaaacctgcaacgtttgaagctggatgcccaggttgtctgtggtgatgcggca
agtccagaagattggtgggatggcaaagcattcgaacggatattggctgacgtaccctgc
tctgcctcgggagtggtgcgccgccatcctgatatcaaatggttgcgcaggcaggaagat
atagcgaattttgcagtacagcaggctcaggtattggaatccctgtggtcgttgctggca
agtgatggtaaattgctttatgcgacctgctcggtatttgcgcgcgagaaccaacaggtg
gttgcagaattccttgcgcggcacgacgatgcgtcaaaaatcgagttatcggcaacgggc
atgatagatggacagttgctgccggacagagagcatgacgggttcttttatgcgctgttg
cacaaacaagcttga
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