Sideroxydans lithotrophicus: Slit_0021
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Entry
Slit_0021 CDS
T01196
Name
(GenBank) transcriptional regulator, LysR family
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
slt
Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slt03000
]
Slit_0021
Transcription factors [BR:
slt03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Slit_0021
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
DUF7753
Death_EDAR
PBP_like
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
ADE10263
UniProt:
D5CTF7
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All DBs
Position
complement(25946..26875)
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AA seq
309 aa
AA seq
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MLPISLRQLQVFESVARHLNHSRAAAELFLTQPAVSMQIKQTETAIGLPLFEQVGKKLFL
TEAGRELLHYARSILQIMGEMESVFDEMKGVERGTLNISVVSTANYFMPQLLAKFIQSHP
KIQVGLSVANRDAVIRQLSENIADLAIMGQPPDGTDMRAEAFMLNPLVVIAAPAHPLAQA
HNIKPRQLANEVFLLREQGSGTRGVVERFFASHKLALPAHMEMDTNEAIKQSVQAGMGIG
IISRHGIELELETRRLVVLDVERFPIVRHWYIVHRKNKRLSTSALEFKRFLLEESENMMS
QDNASPMAP
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgctgccaatttctcttcgccaattgcaggtttttgaaagtgtcgcccgtcatctcaat
cattctcgggctgcggctgagctttttcttacacaaccggctgtttcaatgcagatcaag
caaaccgaaactgccatcggacttccgctgttcgagcaagtaggcaaaaaactgttcttg
actgaggcaggccgtgaactgttgcactatgcacgttccatattgcaaatcatgggggaa
atggagtccgttttcgatgagatgaaaggggttgagcgggggaccctcaatatttcagtg
gtcagcacggccaattatttcatgccgcaactgctggccaagttcattcagtcgcacccc
aagatccaggtcggcctttcggttgccaaccgcgatgccgttatcaggcagctttctgaa
aacattgccgatcttgccattatgggccagcctcccgatggcaccgacatgcgagccgag
gctttcatgttgaatccattggtagtgattgctgcaccggcccatccgcttgcgcaagcc
cacaacatcaaacccagacaattggcaaatgaggtttttctgttgcgtgaacagggttct
gggacgcgcggtgttgttgagcgattttttgcaagtcacaagcttgccctgcctgcacat
atggagatggacaccaatgaagccatcaagcaatcggtgcaggcaggcatgggaattggg
attatctcgcgtcacggtatcgagctggaattggaaaccagacgtcttgttgtgcttgat
gtcgaacgcttccccatcgtacgacactggtacatcgtccatcgcaagaacaagaggctt
tccacttcggcactggagttcaaacgcttcctgctggaagaatctgaaaatatgatgtcg
caggacaatgcctccccaatggctccttaa
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