Sideroxydans lithotrophicus: Slit_0080
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Entry
Slit_0080 CDS
T01196
Name
(GenBank) urea carboxylase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt00220
Arginine biosynthesis
slt00791
Atrazine degradation
slt01100
Metabolic pathways
slt01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
Slit_0080
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
Slit_0080
Enzymes [BR:
slt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
Slit_0080
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Dala_Dala_lig_C
Biotin_lipoyl
GCV_H
Biotin_lipoyl_2
HlyD_3
DUF2118
ATP-grasp_3
RimK
ATP-grasp_5
ATPgrasp_Ter
CotJB
Motif
Other DBs
NCBI-ProteinID:
ADE10322
UniProt:
D5CTL6
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All DBs
Position
83992..87615
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AA seq
1207 aa
AA seq
DB search
MFDKVLIANRGAIACRIIRTLNKMGVRSVAVYSEADARSLHVQLADEAVCIGAAAAADSY
LRGERILEVARSTGAQAIHPGYGFLSENAAFAEQCAEAGVVFIGPTPDQMRRFGLKHTAR
EIAEKNGVPLLPGSGLLVDAGHAHAEASRIGYPVMIKSTAGGGGIGMRLCWSADELNEAF
QSVERLARANFKDAGIYLEKYVEQARHIEVQLFGDGKGTVIALGERDCSVQRRNQKVIEE
TPAPNITPEVRQHLLETAVRLGKAVGYQSAGTVEFVFDALSGEFYFLEVNTRLQVEHGVT
EEVTGVDLVEWMVLQAAGELHALDTVQVKPKGASIQVRLYAEDPNKNFQPSSGVLTGVEF
SADARNETWVERGSDIPPYYDPMIAKIIVKAMNREAALEKMRDALADTRVDGIETNLEYL
RQIVFDRVFAEGRQTTRYLNGFHYRPNTIDVLEPGVQSTIQDYPGRLGYWNIGVPPSGPM
DALAFRLGNQLLGNAEDAAGLELTVSGPTLKFNRDTAIALTGAAMKAELDGKPLKFWRSH
EVKAGSVLRLGAVQGGGCRTYLAVAGGFDVPDYLGSKSTFTLGLFGGHGGRTLRTGDVLH
LGVESAPRAHRALPSNLIPAYSKEWEIGVLYGPHGAPDFFTPSDIQTFFSTEWEVHYNSS
RTGVRLIGPKPEWARQDGGEAGLHPSNIHDNAYAIGAVDFTGDMPVILGPDGPSLGGFVC
PVTIAHGELWKMGQLRPGDTVHFRWMSLEQANHLEQLQDRTISALSLPQTQPAFPAARTM
GSPVVHSIPAKGEQVQVVYRQSGDRNLLIEYGPLVLDINLRFRVHALMQWVQQAMHEGKL
KGILDLTPGIRSLQIHFDSRVLSREDLVKQLIKAEKKLPPIADMEVPTRIVHLPLSWDDP
STKLAIEKYMQSVRKDAPWCPSNIEFIRRINGIADIEQVKRIVFDASYLVLGLGDVYLGA
PVATPLDPRHRLVTTKYNPARTWTPENAVGIGGAYMCVYGMEGPGGYQFVGRTVQMWNRY
KQTQDFEQGKPWLLRFFDQIRFYPVSEQELLKMREDFVAGRFQLKIEETTFSLKEYNLYL
ETNDKEISAFRNTQRAAFAAEREMWKANGQAEYATDNMVAEAGTDSELDLPPGSRAVAAH
VAGNVWAIPAEVGSKVKAGDTLVVIESMKMEIAVVAPCDGEIIQLNCRIGGQVSAGQDLL
VIQGEVS
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgttcgataaagtcttgatagccaatcgcggtgcgatcgcctgccgcatcatccgcacc
ctgaacaagatgggtgtccgttccgtggcggtttactccgaggcagatgcgcgctcgttg
catgtgcagttggcggatgaagccgtgtgcatcggtgctgccgcagcggcagacagctat
ctgcgcggcgagcgtatcctcgaagttgcccgcagtacgggtgcccaggccatccatccc
gggtatggctttctatccgagaacgctgcgtttgccgagcagtgcgcagaggcgggtgtg
gtattcatcggccccacgccggatcaaatgcgccgtttcggtctcaagcacaccgcgcgt
gaaatagccgaaaagaatggtgtgcccttgctacccggcagcggactgctggttgatgcc
ggtcatgcgcacgccgaggcctcacgcatcggctatccggtgatgatcaagagtaccgca
ggtggcggcggcatcggcatgcgtctgtgctggagcgcggacgaactgaacgaggcgttc
cagtcggtagaacgtctcgcgcgcgccaacttcaaggatgccggcatctatctggagaaa
tacgtcgagcaggcgcgccacatcgaggtgcaattgttcggcgacggcaagggtaccgtg
atcgcactgggtgagcgcgactgctcggtgcagcgccgcaaccagaaagtgatcgaagag
acgcccgcacccaacatcacacccgaggtcagacagcatctgctggagactgccgtgcgc
ctgggcaaggccgtgggttaccaatccgcaggcacggtggagttcgtgttcgatgcactc
agcggcgaattctatttcctcgaagtgaacacgcggctgcaagtcgaacacggggtcacc
gaagaagtcaccggtgtcgatctggtcgaatggatggtgctgcaggccgcgggtgaatta
catgcgctggataccgtgcaggtcaaacccaagggcgcatcgatccaggtgcgcctgtac
gcggaagaccccaacaagaacttccagccatccagcggcgtgctgactggcgtcgaattc
tctgccgacgcgcgcaacgagacttgggtggagcgtggcagcgacatcccgccctactac
gatccgatgatcgccaagatcatcgtcaaggcgatgaatcgggaagcggcactggaaaag
atgcgcgatgcgttggccgacacgcgagtggatggaatcgagaccaatctggaatacctg
cgccagatcgtgtttgaccgcgtatttgccgaaggccgccagacgacgcgctacctgaac
ggtttccattaccggccgaacaccatcgacgtgctggaacccggcgtgcaaagcaccata
caggattatcccggccgcctcggttactggaatatcggcgtgcctccatcggggccgatg
gatgcattggcgttccggctgggcaaccagctgctgggcaatgccgaagatgcggcagga
ctggaactgaccgtttccggcccgacgctgaaattcaatcgcgacacggccatcgcactg
accggcgccgcgatgaaggccgaactggatggcaagccgctgaagttctggcgcagtcat
gaggtcaaggctggcagcgtgttgcgcctcggcgcagtgcagggcggcggatgccgtact
tatcttgccgtcgcgggcggcttcgatgtgccggattacctcggcagcaaatccaccttc
acgctgggtctgttcggcggtcacggcgggcgcacgttgcgtaccggcgacgtgctgcac
cttggggtcgaatccgcaccccgcgcgcaccgtgcattgccgtcaaacctgatccctgcg
tacagcaaggaatgggagatcggcgtgttgtatggtccgcacggcgcgccggatttcttc
acgccatccgacatccagacttttttttccaccgaatgggaagtgcattacaactccagc
cgcaccggtgtccgcctgatcggccccaagccggaatgggcgcggcaggatggcggcgag
gccgggctgcatccctccaacatccatgacaatgcctatgcgatcggtgcggtggacttc
accggcgacatgccggtcatcctcggcccggatggccccagcctcggcgggttcgtgtgt
ccggtgactatcgcccatggcgaattgtggaagatgggccagttgcggccgggcgacacg
gtgcattttcgctggatgtcgctggagcaggcgaatcatctggagcaattgcaagaccgg
accatctccgctttgagtttgccgcagacgcaacccgcatttcccgctgccagaacgatg
ggcagtcccgttgtccacagcattcctgccaaaggtgaacaggtacaggtcgtgtatcgc
cagtcgggcgaccgcaacctgctgatcgaatatggcccgctggtgctcgacatcaatttg
cgtttccgcgtgcatgcgctgatgcagtgggtacagcaggcgatgcacgagggcaagctg
aaaggcatcctcgacctgacccccggcatccgttcgttgcagatccatttcgacagccgc
gtgttgtcgcgcgaggacctggtgaagcaactcatcaaggcggaaaagaaactgccgcct
atcgcagacatggaggtgccgacacgcatcgtgcatctgccgctgtcgtgggacgaccct
tctacaaaactggcgatcgaaaaatacatgcaatcggtgcgtaaggatgcgccctggtgt
ccgagcaatattgaattcatccgccgcatcaacggcattgccgacatcgagcaggtgaag
cgcatcgtgttcgacgcgagctatctggtgctgggtctgggcgatgtctacctcggtgca
ccggtggcgacaccgctcgatccgcgccaccgcctggtcactaccaaatacaacccggcg
cgcacctggacgccggagaacgcggtcggcatcggcggtgcctatatgtgcgtgtacggc
atggaaggtcccggcggctaccagttcgtcggacgcacggtgcaaatgtggaaccgctac
aagcagacgcaagatttcgagcagggcaagccatggttgctgcgctttttcgaccagata
cgcttctatcccgtgtcggaacaggagctgctcaagatgcgcgaggacttcgtggccgga
cgcttccagctcaagatcgaggaaaccaccttcagcctgaaggaatacaacctgtacctg
gaaaccaacgacaaagagatcagcgcattccgcaacacgcagcgtgctgcatttgctgca
gaacgcgagatgtggaaagccaacggccaagcggagtacgccacggacaacatggtggcg
gaagccggaaccgacagtgaacttgacctgccgcccggcagccgcgccgtcgccgcccat
gtggccggcaatgtatgggcgattccggccgaggtcggcagcaaggtcaaggcgggcgat
acgctggtggtcatcgaatcgatgaagatggagatcgccgtggtcgcgccgtgtgacggc
gaaatcatccagttgaactgtcgcatcggcggccaggtctcggccggacaggacctgctg
gtcattcaaggcgaggtgagttga
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