Sideroxydans lithotrophicus: Slit_0649
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Entry
Slit_0649 CDS
T01196
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
slt
Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slt03021
]
Slit_0649
Transcription machinery [BR:
slt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Slit_0649
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
MRP-L20
Cas_Cmr5
Motif
Other DBs
NCBI-ProteinID:
ADE10889
UniProt:
D5CNH6
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All DBs
Position
complement(655629..656498)
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AA seq
289 aa
AA seq
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MNASMSLPIPSAVGSLESYVQAVNRFPVLSHEEELSLANRFKAHNDLDAARQLVLSHLRV
VVSVARGYAGYGLPQADLIQEGNIGLMKAVKRYDATRGVRLVSFALHWIRAEIHEYVVRN
WRLVKIATTKSQRKLFFNLRSMKQGLEPLKPQQVREIAQQLNVSERDVVEMEARFAGHEV
ALEPLSGEEDESYAPISYLADNAEHEPSYILEAAEREHLHTAGLAQALASLDERSRRIVE
ARWLRDEEEHAATLHELADEFKVSAERIRQIEQKALSKMQALLAAPATA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcatccatgagtctgccgattccgtctgccgtgggcagtctggaaagctatgtt
caggccgtaaatcgctttcctgtgctgtcgcatgaggaagagctctccttggcgaatcgc
ttcaaagcccacaacgatctggacgcagcgcgtcagttagtgctttctcacctgcgcgtg
gtcgtcagcgttgcgcgcggttatgccggttatggcctgccgcaagcggatctgatccag
gaaggcaacatcggcttgatgaaagcggtgaagcgctatgacgcaacgcgcggcgtccgt
ctggtgtcgttcgccttgcactggatccgggctgagattcacgaatatgtggtgcgcaac
tggcgcttggtaaagatcgcaacgaccaaatcgcaacgcaagctgttctttaacctgcgc
agcatgaaacaggggctggaaccgctcaagccgcagcaagtgcgcgagatcgcccagcaa
ctcaatgtaagcgagcgcgacgtggtggagatggaagcgcgttttgccgggcatgaggta
gcgcttgaaccgctttctggcgaagaagacgagagctacgcacctatcagttatctggcg
gacaacgccgagcacgagccatcgtacattctggaagctgccgaacgtgagcacctgcat
actgctggattggcgcaagccttggcaagtctggatgaacgcagccgtcgcatcgttgaa
gcgcgctggctgcgcgatgaggaggaacatgcggcaacactgcacgaattggccgacgaa
ttcaaggtctctgccgaacgtatccgccagatagagcaaaaggcattgagcaagatgcag
gcgctgttagccgcacctgccactgcataa
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