Sideroxydans lithotrophicus: Slit_0685
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Entry
Slit_0685 CDS
T01196
Name
(GenBank) type II secretion system protein E
KO
K02652
type IV pilus assembly protein PilB
Organism
slt
Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
slt02044
]
Slit_0685
02035 Bacterial motility proteins [BR:
slt02035
]
Slit_0685
Secretion system [BR:
slt02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Slit_0685
Bacterial motility proteins [BR:
slt02035
]
Pilus system
Pilus assembly proteins
Slit_0685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_16
AAA_14
AAA_22
AAA_7
AAA_30
nSTAND3
AAA_29
AAA_11
ATPase_2
AAA_19
AAA
AAA_18
cobW
AAA_23
ResIII
ABC_tran
Herpes_ori_bp
NTPase_1
ATP_bind_1
Rad17
NPHP3_N
DEAD
SRP54
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
ADE10924
UniProt:
D5CNL1
LinkDB
All DBs
Position
complement(687957..689663)
Genome browser
AA seq
568 aa
AA seq
DB search
MAAPQQQTQQPIGHLLIAKGVISEDQLRIATQEQNKTPQPLGRLLVRLGFLSEATIRDVL
SENLGQESVDLTNVLVDPAAIGLVPKEIARRYILLPLSVDAANKIPTIAIADPDNIIALD
QVRALLRDEYRLVTQLASESDILRAIDQYYGFELSIDGILHEIEPGEMDHQNLQQGVNEF
SQPVVRLIDALLTEAVQTGASDIHFEPESSFLRIRYRVDGVLRQVRSLHKSFWPAMVVRL
KVMSGMNIAETRAPQDGRISLRLSGRPIDFRVASHPTSYGENLVLRILDRQKGIVPINQI
GLDETALNTLKTIIAKPEGIVLVTGPTGSGKTTTLYSVLNHVNTESVNIMTLEDPVEYPI
PLIRQSSVNEAAKLDFVSGIRSLMRQDPDIILVGEIRDHPTAEMAFRAAMTGHQVYSTLH
TNSAIGAIPRLLDIGILPDIMAGNIIGIVAQRLIRLLCRHCKYPYHPDHTECKMLGVRHD
ENITIYRAAGCDICQHQGYTGRQAIMEILRMDSDMDDLIARRASIRDLKNNALERGFRPL
AQDGIRRILQGVTSIAEVARVVDLTDRM
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccgcaacaacagacccagcagcccatcgggcacctgctgatagccaagggg
gtgatcagcgaggaccagcttcgcatcgccacccaggagcagaacaagacgccgcaaccg
ctgggccgtctgctggtccgtctcggcttcctgtctgaagcgaccatacgcgatgtattg
tccgagaatctcggccaggaaagcgtagacctgaccaacgttctggtcgatcccgccgcg
atcggactggtccccaaagagatcgcccgccgttacatcctgttgccgctgtcggtcgat
gcagccaacaagataccgaccatcgcgatcgccgacccggacaacatcatcgcgctcgac
caggtacgcgcattgctgcgcgacgaataccgcctggtcacgcaactcgccagcgaatcg
gacatcctccgcgccatcgaccaatactacggcttcgagctgtccatcgacggcatcctg
cacgagatcgaaccgggggaaatggatcaccagaacctccagcagggcgtgaacgaattc
agccagccggtggtacgcctgatcgacgcgttgctcaccgaggccgtgcaaacgggcgct
tccgacatccacttcgagcctgaaagcagcttcctgcgcatccgttatcgtgtcgacggc
gtgctgcgccaggtgcgcagcctgcacaagagtttctggcccgccatggtggtgcgcctg
aaagtgatgagcggcatgaacatcgccgaaacgcgcgcgccgcaggacggacgtatctcg
ctgcggctatccggccgcccgatcgatttccgcgtcgcctcgcacccgacgtcgtatggc
gaaaacctggtgctgcgtatcctcgaccggcaaaagggcatcgtgccgatcaaccagatc
ggcctggacgagaccgcactcaacacactcaagaccatcatcgccaagccggaaggcatc
gtgctggtgaccggccccaccggcagcggcaagacgaccacgttgtattcggtgctgaac
catgtcaacaccgagtcggtgaacatcatgaccctggaagacccggtggaatatccgatc
ccgctgatccgccagagctcggtgaacgaagcggcgaagctggatttcgtcagcggtatc
cgttccctgatgcgccaggacccggacatcatcctggtcggcgagatccgcgatcatccg
accgccgagatggcgttccgcgccgccatgaccggccaccaggtctattcgacgctgcac
accaactccgccatcggcgcgatcccgcgcctgctcgacatcggcatcctgcccgacatc
atggcgggcaacatcatcggcatcgtcgcccagcggctgatacgcctgctgtgccgccac
tgcaaatatccataccacccggaccataccgaatgcaagatgctcggcgtgcgccatgac
gagaacatcaccatctatcgcgccgccggctgcgacatctgccagcatcagggctatacc
ggacgtcaggcgatcatggagatactcaggatggacagcgacatggacgacctgatcgcc
cgtcgcgccagcatacgcgacctgaagaacaacgcactggagcgcggcttccgtccgctg
gcccaggacggcatccgccgcatcctgcaaggcgtgacctccatcgccgaagtcgcccgc
gtcgtcgacctgaccgaccggatgtaa
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