Sideroxydans lithotrophicus: Slit_0720
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Entry
Slit_0720 CDS
T01196
Name
(GenBank) histone family protein DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
slt
Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slt03032
]
Slit_0720
03036 Chromosome and associated proteins [BR:
slt03036
]
Slit_0720
03400 DNA repair and recombination proteins [BR:
slt03400
]
Slit_0720
DNA replication proteins [BR:
slt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Slit_0720
Chromosome and associated proteins [BR:
slt03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Slit_0720
DNA repair and recombination proteins [BR:
slt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Slit_0720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Ub-RnfH
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ADE10959
UniProt:
D5CNP6
LinkDB
All DBs
Position
complement(724371..724658)
Genome browser
AA seq
95 aa
AA seq
DB search
MNRSDLISKLAEQTPNLQAKDVELGVRVILDKLATTISKGNRVEIRGFGSFGLNYRKPRN
GRNPKTGAKIEVAAKYHPRFKPGKALKEMPIQGEK
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcagcgacctgatctccaagttggccgaacaaacgccgaacctgcaggcaaaa
gatgtcgagcttggggtgagggtcatcctggataaattggcaacgaccatctcgaaaggc
aatcgcgtggagatccgcggttttggcagcttcggcctgaattaccgaaaaccgcgcaat
ggtcgcaatccgaagactggcgcgaagattgaggttgctgccaaataccatccgcgattc
aagccgggaaaagcgctaaaagaaatgcccatccaaggtgaaaaatga
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