Sideroxydans lithotrophicus: Slit_0793
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Entry
Slit_0793 CDS
T01196
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Slit_0793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slt03021
]
Slit_0793
03400 DNA repair and recombination proteins [BR:
slt03400
]
Slit_0793
Enzymes [BR:
slt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Slit_0793
Transcription machinery [BR:
slt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Slit_0793
DNA repair and recombination proteins [BR:
slt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Slit_0793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ADE11032
UniProt:
D5CP91
LinkDB
All DBs
Position
783076..784047
Genome browser
AA seq
323 aa
AA seq
DB search
MSNNNLLKPRIIDVQRSSATQARVVMEPFERGYGHTLGNALRRVLLSSMPGYAVTEVKIA
GVLHEYSSIDGVQEDVVEILLNLKGLVLKLHNSREATLHLRKSGAGVVTAADIEVGADTE
VINPNHVIAHLAAGGKLDMEIKVEQGRGYVSAISRMQPGATRPVGHIALDASFSPISRVS
YAVESARVEQRTDLDKLIMDIETNSAIDPEEAIRYAARILMDQLSVFAALEGTPAPVEKP
QTPKVDPMLLRPVDDLELTPRSSNCLKAQSIHYIGDLIQNTEADLLRTPNLGRKSLNEIK
QVLAEHGLSLGMKLENWTAMSEK
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacaataatctgttgaaacctcgcatcatcgacgttcagcgttcatctgccact
caagcgcgagtggtgatggagcctttcgagcgcggctatggacacacgctgggcaacgcc
ctgcgtcgcgttctgctgtcctccatgcccggctacgcggtgactgaagtcaagatcgcg
ggtgtgctgcacgaatactcatccatcgacggcgtgcaggaagacgtggtcgagatcctg
ctgaacctgaaggggctcgtgctcaagctgcataattcgcgcgaagcgactctgcatctg
cgcaagtccggggcgggcgtggtgacagctgccgacatcgaagtcggtgccgacaccgaa
gtcatcaatcctaaccatgtcatcgcccacctggctgctggcggcaagctggacatggag
atcaaggtcgaacaaggccgcggttacgtttccgccatctcgcgcatgcagcccggtgct
acccgcccggtcggccatatcgcactggacgcatcgttcagtccgatctcccgagtcagc
tatgcggtggaaagcgcccgtgtcgaacagcgcaccgacctcgacaagctgatcatggac
atcgagaccaacagcgccatcgatcccgaagaagcgatccgttatgcagcacgcatcctg
atggatcagctctccgtgttcgctgccctggaaggcaccccggctccggtcgagaagcca
cagactccgaaggtcgatccgatgctgttgcgtccggtcgatgatttggaactgacgccg
cgctcttccaactgcctcaaggcccagagcatccattacatcggcgatctgattcagaac
accgaagcagacctgttgcgcaccccgaacctgggccgcaagtcgctcaacgagatcaag
caagtgctggccgagcatggcctgtcgctgggcatgaagttggaaaactggaccgcaatg
tccgagaaataa
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