Sideroxydans lithotrophicus: Slit_0856
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Entry
Slit_0856 CDS
T01196
Name
(GenBank) transcriptional regulator, NifA, Fis Family
KO
K02584
Nif-specific regulatory protein
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Slit_0856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slt03000
]
Slit_0856
Transcription factors [BR:
slt03000
]
Prokaryotic type
Helix-turn-helix
Other families
Slit_0856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
GAF_3
AAA_2
AAA
Mg_chelatase
AAA_16
AAA_3
AAA_7
Parvo_NS1
Kinesin
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ADE11094
UniProt:
D5CPF3
LinkDB
All DBs
Position
complement(841156..842709)
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AA seq
517 aa
AA seq
DB search
MVEERIERRSGHELDLLRSELETLYQVSKVLSRSLNFKETLDGVLHALHEGVALERGMVS
LIDAASGELQVSLVYGVSDAVTEEVSYQPGEGVVGTILKTGNSIVVACIMDEPRFLSRMG
IYNPQGAFVGVPIRIGQKVVGVLAAQPAPSITKQLSEYQRFLEMVANLIGQSVRLSQEVA
QEKNEIAEERDVLRRTVRGQYGFDNIIGHTQPMRRIFEQVRLVAKWNTTVLIRGETGTGK
ELIANAIHYNSPRARGSFVKLNCAALPETLLESELFGHEKGAFTGAVAQRKGRFEQAEGG
TVFLDEIGEISPSFQAKLLRVLQEGELERVGGTKTIKVDVRVVAATHRDLEAEVEKGRFR
EDLYYRLNVMPLYLPPLRDRMEDIPEIARFLVEKISTQQGRQLNLTDAALRVLMHHDWPG
NVRELENCLERASVMTEGDTIDRDAILLTGIDEKISASRGAIQELDLDDPNLDEREKVIA
ALEQAGWVQAKAARLLDMTPRQIAYRIQTLNIKVRQI
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagaacgcatcgaaagaaggtctgggcacgagctcgacctgctccgctctgaa
ctggagacgctgtaccaggtgagcaaggtgttgtcgcgttcgctcaacttcaaggaaacg
ctggacggcgtgctgcatgcactgcatgaaggcgtcgcgctggaacgcggcatggtcagc
ctgatcgacgccgcaagcggcgagttgcaggtatcgctggtgtacggcgtatcggatgcc
gtcaccgaagaggtcagctatcagcccggcgaaggcgtggtcggcaccatcctcaagacc
ggcaacagcatcgtggtcgcatgcatcatggacgaaccgcgcttcctcagccgcatgggc
atctacaacccgcagggggctttcgtcggcgtgccgatccgcatcggccagaaagtggtc
ggcgtgctggcggcacaacccgcgcccagcatcaccaaacagctcagcgaataccagcgc
ttcctcgagatggtcgccaacctgatcggccagagcgtgcgcctgtcgcaggaagtggcg
caggaaaagaacgagatcgccgaggagcgcgacgtgttgcgccgcaccgtgcgcggccag
tacggcttcgacaacatcatcggccacacccagccgatgcggcgcatcttcgagcaagtg
cggctggtggcgaaatggaacaccaccgtgctgatccgcggcgagaccggcaccggcaag
gagctcatcgccaatgccatccattacaactcgccgagggcacgcggcagcttcgtcaag
ctcaactgcgcagcgttgcccgagaccctgctggagagcgaattgttcggccacgagaaa
ggcgccttcaccggcgcggtggcgcaacgcaagggacgcttcgaacaggccgaaggcggc
accgtgttcctcgacgagatcggcgagatatccccgtcgtttcaggccaagcttctgcgc
gtgctgcaggaaggcgagctggaacgcgtcggcggcaccaagaccatcaaggtggatgtg
cgcgtggtcgctgcgacacaccgcgacctggaagccgaagtggaaaagggccgcttccgc
gaagacctgtattaccgtctcaacgtcatgccgctgtacctgccgccgctgcgcgaccgc
atggaagacatccccgagatcgcgcgcttcctggtggaaaagatcagcacacaacagggc
cggcaactcaacctgaccgacgccgcgctgcgcgtgctcatgcatcacgactggcccggc
aacgtacgcgaactggagaactgcctggagcgcgcttcggtgatgaccgagggcgacacc
atcgaccgcgacgccatcctgctcaccggcatcgacgaaaagatctcggccagccgcggc
gcgatccaggaactggatctcgacgaccccaacctcgacgaacgcgagaaagtcatcgcc
gcgctggaacaggcaggctgggtgcaggccaaggctgcgcgactgctcgacatgacaccg
cgccagatcgcctatcgcatccagacgctgaacatcaaggtgcggcagatctag
DBGET
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