Sideroxydans lithotrophicus: Slit_0939
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Entry
Slit_0939 CDS
T01196
Name
(GenBank) Fmu (Sun) domain protein
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
slt
Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slt03009
]
Slit_0939
Enzymes [BR:
slt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
Slit_0939
Ribosome biogenesis [BR:
slt03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Slit_0939
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltransf_31
Ubie_methyltran
Methyltransf_25
MTS
Methyltr_RsmF_N
FtsJ
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
ADE11177
UniProt:
D5CQ13
LinkDB
All DBs
Position
complement(923728..924999)
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AA seq
423 aa
AA seq
DB search
MLLTEYRLDLVIQALRAALKMEHPSDAVLRHFFQAERIGSNERSLVAETLFGVLRHRLFL
DHACTLDDKGQATARRMALAYWVRFGGYNLRELEPLLKPKEAEWLGKVKSIDANALPLSI
QAELPEWIVEKLRPQHSDDEILALGRSMQQSAPLDLRVNTLLAGRNEVLQSLQAEGMDAQ
ATPYSPIGIRLKYKPALNKHALFLTGKFEVQDEGSQLLGILLAPKRNDMVVDFCAGAGGK
TLMLGAMMNSQGRLYAWDVSEKRLTNLKPRLKRSGLSNVQPQLIAHENDNKVKRLAGKID
RVLVDAPCSGLGTLRRNPDLKFRQSAQSVAELNEKQAAILASAARLLKQGGRLVYATCSL
LHEENQAIVQAFLAAHPDFTLVPASDVLRQQHIDLAMGDYLQLTPQYHNTDGFFAAVMER
RNA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgctgttaactgaataccgtctcgacctggtcatacaagccctgcgtgcagccctgaaa
atggaacatccgtccgatgccgtgttgcgccatttcttccaggccgaacgcatcggttcc
aacgaacgctcgctggtggccgaaacactgttcggcgtgctgcgccatcgcctgttcctc
gatcatgcctgcaccctcgacgacaaaggacaagccacggcgcggcgcatggccctggcc
tattgggtcaggttcggcggctacaacctgcgcgaactggagccgctgctcaaacccaag
gaagctgaatggctgggcaaagtgaagagcatcgacgcaaacgctctgccgctttccatc
caggcggaattgcctgaatggatcgtcgaaaaactgcgcccgcaacacagcgacgacgaa
atccttgcgctgggtcgctccatgcaacagtccgccccgctcgatctgcgcgtgaacacg
ctgctcgccggacgcaacgaagtgctgcaatccctgcaagccgaaggcatggatgctcag
gcgacaccttattcaccgattggcatccgcctcaaatacaaaccggcgctgaacaaacac
gcattgttcctcaccggcaaattcgaagtgcaggacgaaggcagccagctgctggggata
ttgctcgcgccgaaacgcaacgacatggtggtggatttctgcgccggcgcgggcggcaag
acgctgatgctgggcgcaatgatgaattctcagggcaggctgtatgcatgggacgtttcg
gaaaaacggctcaccaacctgaagccgcgtttgaaacgttccgggttgagcaacgtgcag
ccgcagctcatcgcccacgaaaacgacaacaaggtaaaaagactggccggcaagatcgac
cgcgtgctggtggatgcaccgtgcagcgggctgggaacgctgcgccgcaatccggatctc
aagttccgccagtcggctcagagcgtggccgaactcaacgagaaacaggcggcgatcctc
gcttcggctgcgcgtctgctgaaacagggtggccgtctggtctatgccacctgcagcctg
ctgcatgaagagaaccaggccatcgtgcaggcattcctggcggctcaccccgatttcacg
ctggtacctgcaagcgatgtgctgcggcagcaacacatcgatctggcgatgggcgactac
ttgcaactcacccctcaatatcacaatactgacggattcttcgccgccgtgatggaacgt
agaaacgcgtaa
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