Sideroxydans lithotrophicus: Slit_1039
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Entry
Slit_1039 CDS
T01196
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt00730
Thiamine metabolism
slt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Slit_1039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slt03009
]
Slit_1039
Enzymes [BR:
slt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
Slit_1039
Ribosome biogenesis [BR:
slt03009
]
Prokaryotic type
GTPases
Slit_1039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
ABC_tran
Ras
AAA_29
AAA_16
MobB
Septin
nSTAND1
ATP-synt_ab
FeoB_N
AAA_22
NACHT
DUF815
RsgA_N
Dynamin_N
Roc
T2SSE
RNA_helicase
nSTAND3
AIG1
FtsK_SpoIIIE
AAA_25
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ADE11277
UniProt:
D5CQP1
LinkDB
All DBs
Position
complement(1014982..1015845)
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AA seq
287 aa
AA seq
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MSEKLRGQVIAAYGRHYLAELPGGEILECVPRGKKSEVACGDVVEVERTGTDQGVINGIA
PRSTLLYRSDAYKQKLIAANVTQIIVVVATEPSFNDELLARCLLAAHEQKLETLIVLNKC
DLPQIAAARAQLSPYGKIGYKVLELSAKKDVTSLLPFLQGHTSVLVGQSGMGKSTLVNAL
IPAAHAATREISTVLDSGKHTTTHARLYHLNADSHLIDCPGVQLFGLHHLDFAAMERSFP
EFLPYLGSCRFANCSHSHEPDCAIRKATAEGKIDERRLKLFQQITAH
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaaaaactgcgcggccaagtcatcgccgcctatggccggcactatctggcagaa
ttgcccggtggcgagatcctcgaatgtgtgccgcgcggcaagaagagcgaagtcgcctgt
ggcgatgtggtcgaagtggaacgcaccggcaccgaccagggcgtgatcaacggcatcgcg
ccgcgcagcaccctgctctaccgctccgacgcctataaacagaagctgatcgccgccaac
gtcacccagatcatcgtcgtcgtcgccaccgaaccctcgttcaacgacgaattgctggcg
cgctgcctgctcgccgcgcacgagcagaagctggaaacgctgatcgtgctgaacaaatgc
gacctgccccagatcgccgcggcacgcgcgcagctctctccctatggcaagatcggctac
aaggtgctggaactatccgcgaagaaggacgtgacctcgctgctgccattcctgcaaggg
cacaccagcgtgctggtgggccaatccggcatgggcaaatccacactcgtcaacgccctc
atccccgccgcacacgccgccacgcgcgagatctccaccgtactcgactcaggcaagcac
accacgacacacgcgcggctctaccacctgaatgccgacagccacctgatcgactgcccc
ggcgtgcagctgtttggcctgcaccacctggattttgccgcgatggaaagaagcttcccc
gaattcctgccctacctgggatcgtgccgtttcgccaattgcagccattcgcacgaaccc
gactgcgcgatacgcaaggctacggcggaaggaaagatagacgaacggcgcctgaaactt
ttccagcagatcacagcgcactag
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