Sideroxydans lithotrophicus: Slit_1158
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Entry
Slit_1158 CDS
T01196
Name
(GenBank) histone family protein DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
slt
Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slt03032
]
Slit_1158
03036 Chromosome and associated proteins [BR:
slt03036
]
Slit_1158
03400 DNA repair and recombination proteins [BR:
slt03400
]
Slit_1158
DNA replication proteins [BR:
slt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Slit_1158
Chromosome and associated proteins [BR:
slt03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Slit_1158
DNA repair and recombination proteins [BR:
slt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Slit_1158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
ADE11396
UniProt:
D5CR10
LinkDB
All DBs
Position
1137227..1137523
Genome browser
AA seq
98 aa
AA seq
DB search
MTRSELIQQLASRHPELTSNDIEMSVRLILDKISSVLENKARVEIRGFGTFATLHRPPRN
GHNPKTGKVVKVPAKYVPHFRAGKELRVRVNHGNSSIR
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgatcagaactgatacaacagcttgcttcccgtcatcccgagctcacctcaaac
gacatcgagatgagtgtccgcctcatcctggataagatatccagcgttctggaaaacaag
gcaagagtcgaaatacgcggattcggaacctttgcgaccctgcatcgtccgccgcgcaat
ggacataatcccaaaacaggcaaggtggtcaaggtgcctgccaaatatgtgccgcatttc
agggcgggcaaggaattgcgtgtacgagtcaatcacggtaactccagcatccgttag
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integrated database retrieval system
